RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 DOCK2Q92608 1830 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 MBD4O95243 580 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 FOSBP53539 338 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 ERFEQ4G0M1 354 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 KDM4AO75164 1064 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 MSNP26038 577 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 ANKRD18AQ8IVF6 992 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 NKX2-3Q8TAU0 364 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-204ENST00000538177 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 CPLX1O14810 134 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 PPFIA3O75145 1194 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 NR1I2O75469 434 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 GNAT2P19087 354 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 GUCY1B3Q02153 619 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 UBE4AQ14139 1066 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 CAMK4Q16566 473 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 FBXO18Q8NFZ0 1043 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 IGDCC4Q8TDY8 1250 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 USP28Q96RU2 1077 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
SLC28A1-204ENST00000538177 B4E1Z4 1266 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 NAPBQ9H115 298 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 ZNF500O60304 480 aaPredicted RBP13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 TYRO3Q06418 890 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 COL4A1P02462 1669 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 NEDD4P46934 1319 aa13.35□□□□□ -0.27
SLC28A1-204ENST00000538177 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 ADCY5O95622 1261 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 KCNQ4P56696 695 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 APOA5Q6Q788 366 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 FTOQ9C0B1 505 aaKnown RBP eCLIP13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 RTEL1Q9NZ71 1219 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 LIFRP42702 1097 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 LCORLQ8N3X6 602 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 MINPP1Q9UNW1 487 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
SLC28A1-204ENST00000538177 PRKAB2O43741 272 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 CDKL5O76039 1030 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 KRT23Q9C075 422 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
SLC28A1-204ENST00000538177 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 STAG1Q8WVM7 1258 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 TIAM2Q8IVF5 1701 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 CTAGE5O15320 804 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms