RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 PRKG1Q13976 671 aa13.59□□□□□ -0.23
TNC-209ENST00000534839 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
TNC-209ENST00000534839 NKX2-3Q8TAU0 364 aa13.59□□□□□ -0.23
TNC-209ENST00000534839 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
TNC-209ENST00000534839 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
TNC-209ENST00000534839 ZNF646O15015 1829 aaPredicted RBP13.59□□□□□ -0.23
TNC-209ENST00000534839 PRUNE2Q8WUY3 3088 aa13.59□□□□□ -0.23
TNC-209ENST00000534839 DUOX1Q9NRD9 1551 aa13.58□□□□□ -0.23
TNC-209ENST00000534839 TDHQ8IZJ6 230 aa13.58□□□□□ -0.24
TNC-209ENST00000534839 RDH13Q8NBN7 331 aa13.58□□□□□ -0.24
TNC-209ENST00000534839 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
TNC-209ENST00000534839 ABCC4O15439 1325 aa13.58□□□□□ -0.24
TNC-209ENST00000534839 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
TNC-209ENST00000534839 CFHP08603 1231 aa13.57□□□□□ -0.24
TNC-209ENST00000534839 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
TNC-209ENST00000534839 ARHGEF6Q15052 776 aa13.57□□□□□ -0.24
TNC-209ENST00000534839 LDLRAD1Q5T700 205 aa13.57□□□□□ -0.24
TNC-209ENST00000534839 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
TNC-209ENST00000534839 MAFAQ8NHW3 353 aaPredicted RBP13.57□□□□□ -0.24
TNC-209ENST00000534839 FAM109BQ6ICB4 259 aaPredicted RBP13.56□□□□□ -0.24
TNC-209ENST00000534839 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
TNC-209ENST00000534839 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
TNC-209ENST00000534839 GJB1P08034 283 aa13.55□□□□□ -0.24
TNC-209ENST00000534839 CD46P15529 392 aa13.55□□□□□ -0.24
TNC-209ENST00000534839 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
TNC-209ENST00000534839 PTPN18Q99952 460 aa13.55□□□□□ -0.24
TNC-209ENST00000534839 FZD1Q9UP38 647 aa13.55□□□□□ -0.24
TNC-209ENST00000534839 TTC28Q96AY4 2481 aa13.55□□□□□ -0.24
TNC-209ENST00000534839 LAMB1P07942 1786 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 ECE2O60344 883 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
TNC-209ENST00000534839 ZBTB48P10074 688 aaPredicted RBP13.54□□□□□ -0.24
TNC-209ENST00000534839 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
TNC-209ENST00000534839 NF2P35240 595 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 ZMYND8Q9ULU4 1186 aaPredicted RBP13.54□□□□□ -0.24
TNC-209ENST00000534839 ZSWIM8A7E2V4 1837 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 TAF1P21675 1872 aa13.54□□□□□ -0.24
TNC-209ENST00000534839 KCNQ3O43525 872 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 BBOX1O75936 387 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 CCL5P13501 91 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
TNC-209ENST00000534839 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 NBPF10Q6P3W6 841 aaKnown RBP13.53□□□□□ -0.24
TNC-209ENST00000534839 NYAP1Q6ZVC0 841 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
TNC-209ENST00000534839 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
TNC-209ENST00000534839 LAMA2P24043 3122 aaKnown RBP13.53□□□□□ -0.24
TNC-209ENST00000534839 MS4A1P11836 297 aa13.52□□□□□ -0.25
TNC-209ENST00000534839 GCGRP47871 477 aa13.52□□□□□ -0.25
TNC-209ENST00000534839 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
TNC-209ENST00000534839 NLRP3Q96P20 1036 aa13.52□□□□□ -0.25
TNC-209ENST00000534839 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
TNC-209ENST00000534839 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.25
TNC-209ENST00000534839 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.25
TNC-209ENST00000534839 GPTP24298 496 aa13.51□□□□□ -0.25
TNC-209ENST00000534839 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
TNC-209ENST00000534839 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
TNC-209ENST00000534839 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
TNC-209ENST00000534839 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
TNC-209ENST00000534839 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
TNC-209ENST00000534839 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
TNC-209ENST00000534839 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
TNC-209ENST00000534839 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
TNC-209ENST00000534839 NTSR2O95665 410 aa13.5□□□□□ -0.25
TNC-209ENST00000534839 SYN1P17600 705 aa13.5□□□□□ -0.25
TNC-209ENST00000534839 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
TNC-209ENST00000534839 C7orf61Q8IZ16 206 aa13.5□□□□□ -0.25
TNC-209ENST00000534839 UBE2OQ9C0C9 1292 aaKnown RBP13.5□□□□□ -0.25
TNC-209ENST00000534839 GJA5P36382 358 aa13.49□□□□□ -0.25
TNC-209ENST00000534839 TEFQ10587 303 aa13.49□□□□□ -0.25
TNC-209ENST00000534839 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
TNC-209ENST00000534839 KMT5BQ4FZB7 885 aa13.48□□□□□ -0.25
TNC-209ENST00000534839 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
TNC-209ENST00000534839 SCN9AQ15858 1988 aa13.48□□□□□ -0.25
TNC-209ENST00000534839 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
TNC-209ENST00000534839 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
TNC-209ENST00000534839 CACNA1AO00555 2505 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 SGPL1O95470 568 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 IL13P35225 146 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 PRMT2P55345 433 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 RSBN1LQ6PCB5 846 aaPredicted RBP13.47□□□□□ -0.25
TNC-209ENST00000534839 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 MTRQ99707 1265 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 ZFYVE28Q9HCC9 887 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
TNC-209ENST00000534839 C6orf229H3BNL8 230 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 USP17L8P0C7I0 530 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 GRK4P32298 578 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 COPS2P61201 443 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 FUT2Q10981 343 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 TAF1CQ15572 869 aaPredicted RBP13.46□□□□□ -0.25
TNC-209ENST00000534839 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
TNC-209ENST00000534839 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.25
TNC-209ENST00000534839 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms