RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TTLL7Q6ZT98 887 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
CTSB-228ENST00000533455 SFPQP23246 707 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTSB-228ENST00000533455 ELF2Q15723 593 aa19.28■□□□□ 0.68
CTSB-228ENST00000533455 KRT222Q8N1A0 295 aa19.28■□□□□ 0.68
CTSB-228ENST00000533455 ZNF594Q96JF6 807 aaPredicted RBP19.28■□□□□ 0.68
CTSB-228ENST00000533455 FBXO3Q9UK99 471 aa19.28■□□□□ 0.68
CTSB-228ENST00000533455 CPDO75976 1380 aa19.28■□□□□ 0.68
CTSB-228ENST00000533455 KIF28PB7ZC32 967 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 NRDCO43847 1150 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 PFKFB1P16118 471 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 ANTXR2P58335 489 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 FBXO38Q6PIJ6 1188 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 NCOA7Q8NI08 942 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 KCPQ6ZWJ8 1503 aa19.27■□□□□ 0.68
CTSB-228ENST00000533455 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.67
CTSB-228ENST00000533455 CCDC93Q567U6 631 aa19.27■□□□□ 0.67
CTSB-228ENST00000533455 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.67
CTSB-228ENST00000533455 SYNE3Q6ZMZ3 975 aa19.27■□□□□ 0.67
CTSB-228ENST00000533455 CEP126Q9P2H0 1117 aa19.27■□□□□ 0.67
CTSB-228ENST00000533455 FGAP02671 866 aa19.26■□□□□ 0.67
CTSB-228ENST00000533455 APPBP2Q92624 585 aa19.26■□□□□ 0.67
CTSB-228ENST00000533455 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
CTSB-228ENST00000533455 TUBE1Q9UJT0 475 aa19.26■□□□□ 0.67
CTSB-228ENST00000533455 MROH7-TTC4A0A0A0MT08 1334 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 HAND2P61296 217 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 SLC39A14Q15043 492 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.25■□□□□ 0.672e-7■■□□□ 12.3
CTSB-228ENST00000533455 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 V9GYY5 206 aaPredicted RBP19.25■□□□□ 0.67
CTSB-228ENST00000533455 FAM237AA0A1B0GTK4 181 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 CPLX1O14810 134 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 CCP110O43303 1012 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 SLFN14P0C7P3 912 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 FANCCQ00597 558 aa19.25■□□□□ 0.67
CTSB-228ENST00000533455 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
CTSB-228ENST00000533455 WASHC4Q2M389 1173 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 RALYLQ86SE5 291 aaKnown RBP19.24■□□□□ 0.67
CTSB-228ENST00000533455 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 BIN1O00499 593 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 PPP6R2O75170 966 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 H2AFXP16104 143 aaPredicted RBP19.24■□□□□ 0.67
CTSB-228ENST00000533455 XAGE2Q96GT9 111 aa19.24■□□□□ 0.67
CTSB-228ENST00000533455 AKAP11Q9UKA4 1901 aa19.23■□□□□ 0.67
CTSB-228ENST00000533455 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
CTSB-228ENST00000533455 WDHD1O75717 1129 aaPredicted RBP19.23■□□□□ 0.67
CTSB-228ENST00000533455 ADORA1P30542 326 aa19.23■□□□□ 0.67
CTSB-228ENST00000533455 SYT10Q6XYQ8 523 aa19.23■□□□□ 0.67
CTSB-228ENST00000533455 PHLPP2Q6ZVD8 1323 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 MYO1BO43795 1136 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 ISCA1Q9BUE6 129 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 ATRNO75882 1429 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 ZNF213O14771 459 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 CBFA2T2O43439 604 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 SYKP43405 635 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 GORABQ5T7V8 394 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 ZNF771Q7L3S4 317 aaPredicted RBP19.22■□□□□ 0.67
CTSB-228ENST00000533455 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
CTSB-228ENST00000533455 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
CTSB-228ENST00000533455 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 GJB4Q9NTQ9 266 aa19.22■□□□□ 0.67
CTSB-228ENST00000533455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTSB-228ENST00000533455 FAM193AP78312 1265 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 TERF2Q15554 542 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 CCDC57Q2TAC2 916 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 TMX1Q9H3N1 280 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 ZBTB3Q9H5J0 574 aa19.21■□□□□ 0.67
CTSB-228ENST00000533455 GPAA1O43292 621 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 IGSF3O75054 1194 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
CTSB-228ENST00000533455 ETF1P62495 437 aaKnown RBP19.2■□□□□ 0.66
CTSB-228ENST00000533455 MYL5Q02045 173 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 SCARF1Q14162 830 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 PTPAQ15257 358 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
CTSB-228ENST00000533455 ZNF446Q9NWS9 450 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 TNS2Q63HR2 1409 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 TNS3Q68CZ2 1445 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 CDKL5O76039 1030 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 A1BGP04217 495 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 ZAP70P43403 619 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 TAF3Q5VWG9 929 aa19.2■□□□□ 0.66
CTSB-228ENST00000533455 ANGEL1Q9UNK9 670 aaKnown RBP19.2■□□□□ 0.66
CTSB-228ENST00000533455 RIC1Q4ADV7 1423 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 ATP1A3P13637 1013 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 SHC4Q6S5L8 630 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 FCHSD1Q86WN1 690 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 VPS37DQ86XT2 251 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 RAB11FIP4Q86YS3 637 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 PLA2G12BQ9BX93 195 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 NBPF3Q9H094 633 aa19.19■□□□□ 0.66
CTSB-228ENST00000533455 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 SH2B2O14492 632 aaPredicted RBP19.18■□□□□ 0.66
CTSB-228ENST00000533455 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
CTSB-228ENST00000533455 ERCC6LQ2NKX8 1250 aa19.18■□□□□ 0.66
CTSB-228ENST00000533455 RESP18Q5W5W9 173 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms