RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C8orf76Q96K31 380 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 CDCA7Q9BWT1 371 aaPredicted RBP17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 DHX16O60231 1041 aaKnown RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 SLC5A1P13866 664 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 TRDNQ13061 729 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 SASS6Q6UVJ0 657 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 C17orf53Q8N3J3 647 aaPredicted RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 SPC24Q8NBT2 197 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 EPB41L4AQ9HCS5 686 aaPredicted RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 AHDC1Q5TGY3 1603 aaPredicted RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 B4E1Z4 1266 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 CPLX1O14810 134 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 NTSR2O95665 410 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 RXRAP19793 462 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 ME1P48163 572 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 BCAMP50895 628 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 PCDHA7Q9UN72 937 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 NEDD4P46934 1319 aa17.93■□□□□ 0.46
CACNA1E-208ENST00000533229 MYH3P11055 1940 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 KCNQ2O43526 872 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 ZNF165P49910 485 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 KCNF1Q9H3M0 494 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
CACNA1E-208ENST00000533229 PATL2C9JE40 543 aaKnown RBP17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 MBD4O95243 580 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 CDC27P30260 824 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 PARP10Q53GL7 1025 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 LINC00301Q8NCQ3 95 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
CACNA1E-208ENST00000533229 A0A087WWV3 80 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 TPM2P07951 284 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 CCDC152Q4G0S7 254 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 FSIP1Q8NA03 581 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 MYO5AQ9Y4I1 1855 aaKnown RBP17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 PRKAB2O43741 272 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 FAM160A1Q05DH4 1040 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 ALX1Q15699 326 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 C11orf57Q6ZUT1 292 aaPredicted RBP17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
CACNA1E-208ENST00000533229 ZMYM6O95789 1325 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 WTIPA6NIX2 430 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 METAP2P50579 478 aaKnown RBP eCLIP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 NOLC1Q14978 699 aaKnown RBP eCLIP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 CCDC73Q6ZRK6 1079 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 MYH7P12883 1935 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 TERF1P54274 439 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 KIF23Q02241 960 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 CHRNDQ07001 517 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 ADALQ6DHV7 355 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 FMR1NBQ8N0W7 255 aaPredicted RBP17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 MYL10Q9BUA6 226 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 LY9Q9HBG7 655 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 ZSWIM5Q9P217 1185 aa17.89■□□□□ 0.45
CACNA1E-208ENST00000533229 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 COL4A1P02462 1669 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 IQCB1Q15051 598 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 MICU3Q86XE3 530 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 LCORLQ8N3X6 602 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 PHKBQ93100 1093 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 NAPBQ9H115 298 aa17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
CACNA1E-208ENST00000533229 UBE2Q2LH0YL09 131 aa17.87■□□□□ 0.45
CACNA1E-208ENST00000533229 KINO60870 393 aaKnown RBP17.87■□□□□ 0.45
CACNA1E-208ENST00000533229 NTRK3Q16288 839 aa17.87■□□□□ 0.45
CACNA1E-208ENST00000533229 C3orf67Q6ZVT6 689 aa17.87■□□□□ 0.45
CACNA1E-208ENST00000533229 PLA2G4DQ86XP0 818 aa17.87■□□□□ 0.45
CACNA1E-208ENST00000533229 POLR3EQ9NVU0 708 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms