RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 A0A1W2PQ64 194 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 A0A1W2PQD8 194 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 KINO60870 393 aaKnown RBP20.09■□□□□ 0.81
BRCA2-204ENST00000530893 CDKL5O76039 1030 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 ME1P48163 572 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 MAP3K12Q12852 859 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 SNW1Q13573 536 aaKnown RBP20.09■□□□□ 0.81
BRCA2-204ENST00000530893 DDB1Q16531 1140 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 ADALQ6DHV7 355 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 ENGASEQ8NFI3 743 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
BRCA2-204ENST00000530893 MPHOSPH8Q99549 860 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 NBPF3Q9H094 633 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 POLR3EQ9NVU0 708 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 SPATA31A1Q5TZJ5 1347 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 LAMB2P55268 1798 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 PHLPP1O60346 1717 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 NRAPQ86VF7 1730 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 YEATS4O95619 227 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 FOSBP53539 338 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 KCNG4Q8TDN1 519 aa20.09■□□□□ 0.81
BRCA2-204ENST00000530893 TTC12Q9H892 705 aaPredicted RBP20.09■□□□□ 0.81
BRCA2-204ENST00000530893 APPP05067 770 aa20.08■□□□□ 0.8
BRCA2-204ENST00000530893 GUCY1B3Q02153 619 aa20.08■□□□□ 0.8
BRCA2-204ENST00000530893 NOLC1Q14978 699 aaKnown RBP eCLIP20.08■□□□□ 0.8
BRCA2-204ENST00000530893 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.8
BRCA2-204ENST00000530893 SPTLC3Q9NUV7 552 aa20.08■□□□□ 0.8
BRCA2-204ENST00000530893 SH2B2O14492 632 aaPredicted RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 STX1AQ16623 288 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 FTOQ9C0B1 505 aaKnown RBP eCLIP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 PATL2C9JE40 543 aaKnown RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 ATP6V1AP38606 617 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 LINC00301Q8NCQ3 95 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 MRPS27Q92552 414 aaKnown RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 ZNF830Q96NB3 372 aaPredicted RBP20.07■□□□□ 0.8
BRCA2-204ENST00000530893 GOLPH3LQ9H4A5 285 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
BRCA2-204ENST00000530893 CAMTA2O94983 1202 aa20.06■□□□□ 0.8
BRCA2-204ENST00000530893 PLA2G4DQ86XP0 818 aa20.06■□□□□ 0.8
BRCA2-204ENST00000530893 DNAJC25Q9H1X3 360 aa20.06■□□□□ 0.8
BRCA2-204ENST00000530893 LOC102724428A0A0B4J2F2 783 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 GNAT2P19087 354 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 IGHMBP2P38935 993 aaKnown RBP20.05■□□□□ 0.8
BRCA2-204ENST00000530893 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.8
BRCA2-204ENST00000530893 SIK1P57059 783 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 MYSM1Q5VVJ2 828 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 SGMS1Q86VZ5 419 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 FSIP1Q8NA03 581 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 CNNM2Q9H8M5 875 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 PCDHA7Q9UN72 937 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 RASGRF1Q13972 1273 aa20.05■□□□□ 0.8
BRCA2-204ENST00000530893 TIAM2Q8IVF5 1701 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 STK38Q15208 465 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 SARM1Q6SZW1 724 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 SYNE3Q6ZMZ3 975 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 CYB5R4Q7L1T6 521 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 HELBQ8NG08 1087 aaPredicted RBP20.04■□□□□ 0.8
BRCA2-204ENST00000530893 ANO10Q9NW15 660 aa20.04■□□□□ 0.8
BRCA2-204ENST00000530893 GOLGA6L19H0YKK7 550 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 RRP9O43818 475 aaKnown RBP20.03■□□□□ 0.8
BRCA2-204ENST00000530893 CDC25BP30305 580 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 LIFRP42702 1097 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 ZNF75DP51815 510 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
BRCA2-204ENST00000530893 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 FMR1NBQ8N0W7 255 aaPredicted RBP20.03■□□□□ 0.8
BRCA2-204ENST00000530893 KIAA1524Q8TCG1 905 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 NAPBQ9H115 298 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 CHD4Q14839 1912 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 PNPLA7Q6ZV29 1317 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 NTSR2O95665 410 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 KIF23Q02241 960 aaPredicted RBP20.03■□□□□ 0.8
BRCA2-204ENST00000530893 IQCB1Q15051 598 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 MAGEB6Q8N7X4 407 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 IGDCC4Q8TDY8 1250 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
BRCA2-204ENST00000530893 PRIMPOLQ96LW4 560 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 MTA3Q9BTC8 594 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 TRIM5Q9C035 493 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
BRCA2-204ENST00000530893 ZNF831Q5JPB2 1677 aa20.02■□□□□ 0.8
BRCA2-204ENST00000530893 SPTLC2O15270 562 aa20.02■□□□□ 0.8
BRCA2-204ENST00000530893 MPNDQ8N594 471 aa20.02■□□□□ 0.8
BRCA2-204ENST00000530893 KRT23Q9C075 422 aa20.02■□□□□ 0.8
BRCA2-204ENST00000530893 KCNF1Q9H3M0 494 aa20.02■□□□□ 0.8
BRCA2-204ENST00000530893 B4E1Z4 1266 aa20.02■□□□□ 0.79
BRCA2-204ENST00000530893 ZBTB43O43298 467 aa20.02■□□□□ 0.79
BRCA2-204ENST00000530893 DNTTIP2Q5QJE6 756 aaKnown RBP20.02■□□□□ 0.79
BRCA2-204ENST00000530893 SPC24Q8NBT2 197 aa20.02■□□□□ 0.79
BRCA2-204ENST00000530893 NACAP1Q9BZK3 213 aa20.02■□□□□ 0.79
BRCA2-204ENST00000530893 NAT10Q9H0A0 1025 aaKnown RBP20.02■□□□□ 0.79
BRCA2-204ENST00000530893 MBD4O95243 580 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 POLR3DP05423 398 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms