RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.24
USP35-207ENST00000530546 DENND2AQ9ULE3 1009 aa13.52□□□□□ -0.24
USP35-207ENST00000530546 PRC1O43663 620 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 FGFR2P21802 821 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
USP35-207ENST00000530546 BCAMP50895 628 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 CEBPZQ03701 1054 aaKnown RBP13.52□□□□□ -0.25
USP35-207ENST00000530546 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 SPATA5Q8NB90 893 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
USP35-207ENST00000530546 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
USP35-207ENST00000530546 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
USP35-207ENST00000530546 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 AK7Q96M32 723 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
USP35-207ENST00000530546 ZNF652Q9Y2D9 606 aa13.51□□□□□ -0.25
USP35-207ENST00000530546 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 ADCY5O95622 1261 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 KIAA1524Q8TCG1 905 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
USP35-207ENST00000530546 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
USP35-207ENST00000530546 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 KLF18A0A0U1RQI7 1052 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 WTIPA6NIX2 430 aaPredicted RBP13.5□□□□□ -0.25
USP35-207ENST00000530546 CHRNDQ07001 517 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 NCOA7Q8NI08 942 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 USP25Q9UHP3 1055 aa13.5□□□□□ -0.25
USP35-207ENST00000530546 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
USP35-207ENST00000530546 MYH3P11055 1940 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 LIG1P18858 919 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 RESTQ13127 1097 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 STK11IPQ8N1F8 1099 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 LLPHQ9BRT6 129 aaKnown RBP13.49□□□□□ -0.25
USP35-207ENST00000530546 AGXT2Q9BYV1 514 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 INCENPQ9NQS7 918 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 CAMK4Q16566 473 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 LEO1Q8WVC0 666 aaPredicted RBP13.49□□□□□ -0.25
USP35-207ENST00000530546 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
USP35-207ENST00000530546 MBD4O95243 580 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 ANTXR2P58335 489 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 FAM193AP78312 1265 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 TRDNQ13061 729 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
USP35-207ENST00000530546 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
USP35-207ENST00000530546 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 ZNF274Q96GC6 653 aaPredicted RBP13.48□□□□□ -0.25
USP35-207ENST00000530546 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 LAMA4Q16363 1823 aa13.48□□□□□ -0.25
USP35-207ENST00000530546 KDM4AO75164 1064 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 VPS72Q15906 364 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP35-207ENST00000530546 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 SLFN14P0C7P3 912 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 RXRAP19793 462 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 MIGA1Q8NAN2 632 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 STRBPQ96SI9 672 aaKnown RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 DDX41Q9UJV9 622 aaKnown RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 AKAP11Q9UKA4 1901 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 B4E1Z4 1266 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 PRKAB2O43741 272 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 GYG1P46976 350 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
USP35-207ENST00000530546 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 USP21Q9UK80 565 aa13.47□□□□□ -0.25
USP35-207ENST00000530546 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.25
USP35-207ENST00000530546 MORC2Q9Y6X9 1032 aaPredicted RBP13.46□□□□□ -0.25
USP35-207ENST00000530546 GOLGA6L6A8MZA4 724 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 CPLX1O14810 134 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 GNPATO15228 680 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 IGSF3O75054 1194 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 CTDSPL2Q05D32 466 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.26
USP35-207ENST00000530546 NAPBQ9H115 298 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 DACT1Q9NYF0 836 aa13.46□□□□□ -0.26
USP35-207ENST00000530546 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 MPNDQ8N594 471 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms