RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 MAGEA8P43361 318 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 CFAP70Q5T0N1 1121 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 SOGA3Q5TF21 947 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 ERCC4Q92889 916 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 TMEM87BQ96K49 555 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 TINF2Q9BSI4 451 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 RWDD1Q9H446 243 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 KMT5AQ9NQR1 393 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 PGAP2Q9UHJ9 254 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 LTBP2Q14767 1821 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 CA12O43570 354 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 NBPF7P0C2Y1 421 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 GNALP38405 381 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 GSE1Q14687 1217 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 SYCP2LQ5T4T6 812 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 KLHL10Q6JEL2 608 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 ZNF746Q6NUN9 644 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 NLRP13Q86W25 1043 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 PARP9Q8IXQ6 854 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 MIGA1Q8NAN2 632 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 CENPTQ96BT3 561 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 RUNDC1Q96C34 613 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 GCC1Q96CN9 775 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 SERINC2Q96SA4 455 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 IER2Q9BTL4 223 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 MMTAG2Q9BU76 263 aaKnown RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 AS3MTQ9HBK9 375 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 ENAMQ9NRM1 1142 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 RABL2AQ9UBK7 228 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 N6AMT1Q9Y5N5 214 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 MRPL42Q9Y6G3 142 aaKnown RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 RPAP1Q9BWH6 1393 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 AKAP11Q9UKA4 1901 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 ANKRD18BA2A2Z9 1011 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 KLRG2A4D1S0 409 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 A6NJY4 79 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 PPFIA3O75145 1194 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 FOSL1P15407 271 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 MKRN4PQ13434 485 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 KANK4Q5T7N3 995 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 ANKRD45Q5TZF3 282 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 CCBE1Q6UXH8 406 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 WAPLQ7Z5K2 1190 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 CHCHD4Q8N4Q1 142 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 KRI1Q8N9T8 703 aaKnown RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 VRTNQ9H8Y1 702 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 LZTS1Q9Y250 596 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 TMEM110-MUSTN1A8MSY1 372 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 C19orf81C9J6K1 198 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TNFRSF10BO14763 440 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 EZH2Q15910 746 aaKnown RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 PHLDB3Q6NSJ2 640 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 C16orf54Q6UWD8 224 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TMC1Q8TDI8 760 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 CCDC102AQ96A19 550 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 CDHR1Q96JP9 859 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 ORAI2Q96SN7 254 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 MPHOSPH6Q99547 160 aaKnown RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TRIM6-TRIM34B2RNG4 842 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 LILRB3O75022 631 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 CAND2O75155 1236 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 VAMP4O75379 141 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 S100BP04271 92 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 IL4RP24394 825 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 ERCC5P28715 1186 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 LMBRD2Q68DH5 695 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TAS1R3Q7RTX0 852 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 FILIP1Q7Z7B0 1213 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 NDUFAF2Q8N183 169 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 APPL2Q8NEU8 664 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 C8orf48Q96LL4 319 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TRIM34Q9BYJ4 488 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TANGO6Q9C0B7 1094 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 MAFFQ9ULX9 164 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 ITM2BQ9Y287 266 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 PABPN1LA6NDY0 278 aaKnown RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 PDGFRBP09619 1106 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 XBP1P17861 261 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 NOP2P46087 812 aaKnown RBP4.43□□□□□ -1.7
PTPN22-207ENST00000528414 GLMNQ92990 594 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 TRIM52Q96A61 297 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 ZHX3Q9H4I2 956 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 COMMD8Q9NX08 183 aa4.43□□□□□ -1.7
PTPN22-207ENST00000528414 RASSF10A6NK89 507 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 KIF5CO60282 957 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 LRCH2Q5VUJ6 765 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 USP48Q86UV5 1035 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 CHPFQ8IZ52 775 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 SMARCC1Q92922 1105 aaPredicted RBP4.42□□□□□ -1.7
PTPN22-207ENST00000528414 TNPO1Q92973 898 aaKnown RBP4.42□□□□□ -1.7
PTPN22-207ENST00000528414 VMP1Q96GC9 406 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 CENPOQ9BU64 300 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.42□□□□□ -1.7
PTPN22-207ENST00000528414 TRMT1Q9NXH9 659 aaKnown RBP4.42□□□□□ -1.7
PTPN22-207ENST00000528414 DDX49Q9Y6V7 483 aaKnown RBP4.42□□□□□ -1.7
PTPN22-207ENST00000528414 SEPT2Q15019 361 aa4.42□□□□□ -1.7
PTPN22-207ENST00000528414 PKN1Q16512 942 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms