RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 PPP6R2O75170 966 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 IMMTQ16891 758 aaKnown RBP11.83□□□□□ -0.52
SPIDR-225ENST00000524141 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 CHST3Q7LGC8 479 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 WDR19Q8NEZ3 1342 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 A0A087WZG4 1122 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-225ENST00000524141 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.52
SPIDR-225ENST00000524141 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 CASQ1P31415 396 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 CC2D1AQ6P1N0 951 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-225ENST00000524141 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 HPSEQ9Y251 543 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
SPIDR-225ENST00000524141 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 STX10O60499 249 aa11.82□□□□□ -0.52
SPIDR-225ENST00000524141 IL15P40933 162 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-225ENST00000524141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPIDR-225ENST00000524141 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 PRC1O43663 620 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 GCP02774 474 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 TMEM94Q12767 1356 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 ZBTB22O15209 634 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 CASP7P55210 303 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 LRP10Q7Z4F1 713 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
SPIDR-225ENST00000524141 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
SPIDR-225ENST00000524141 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 CDKL5O76039 1030 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 OAS2P29728 719 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 SLC39A6Q13433 755 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 SMC1AQ14683 1233 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 RALYLQ86SE5 291 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 DPF2Q92785 391 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 AK7Q96M32 723 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 FANCGO15287 622 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 SEC31AO94979 1220 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 GNG11P61952 73 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 RSRC2Q7L4I2 434 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 ELOA2Q8IYF1 753 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
SPIDR-225ENST00000524141 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
SPIDR-225ENST00000524141 M0R2C6 588 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 C4BP0C0L5 1744 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 RESP18Q5W5W9 173 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 TTLL5Q6EMB2 1281 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 NWD2Q9ULI1 1742 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 MAP3K15Q6ZN16 1313 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 CCDC151A5D8V7 595 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 TBX2Q13207 712 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 ISM2Q6H9L7 571 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 TTC5Q8N0Z6 440 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 PSD3Q9NYI0 1048 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 DACH1Q9UI36 760 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-225ENST00000524141 CUTAO60888 179 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 SASH3O75995 380 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 TIMM10P62072 90 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 PNOCQ13519 176 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 BRD3Q15059 726 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 SHC4Q6S5L8 630 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
SPIDR-225ENST00000524141 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms