RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	GPT	P24298	496 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	FLII	Q13045	1269 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	CCDC93	Q567U6	631 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	TATDN2	Q93075	761 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	PHOX2B	Q99453	314 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	IL25	Q9H293	177 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	MYH15	Q9Y2K3	1946 aa		9.36	□□□□□ -0.91
SPIDR-223	ENST00000524033	WDR33	Q9C0J8	1336 aa	Known RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	RCCD1	A6NED2	376 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	APBB1	O00213	710 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	DDN	O94850	711 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	SSTR3	P32745	418 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	PBX2	P40425	430 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	CRY2	Q49AN0	593 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	SUSD4	Q5VX71	490 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	OLFM4	Q6UX06	510 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	PPP1R42	Q7Z4L9	355 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	ZNF34	Q8IZ26	560 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	PI4K2B	Q8TCG2	481 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	RPGR	Q92834	1020 aa	Known RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	KCNB2	Q92953	911 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	SYAP1	Q96A49	352 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	ZNF277	Q9NRM2	450 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	KIAA1468	Q9P260	1216 aa		9.35	□□□□□ -0.91
SPIDR-223	ENST00000524033	NRXN2	Q9P2S2	1712 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	SMAP	O00193	183 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	DYNC1I1	O14576	645 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	SGSM2	O43147	1006 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	RAB11FIP3	O75154	756 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	HOXA10	P31260	410 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	PARP10	Q53GL7	1025 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	CCDC30	Q5VVM6	783 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	TSHZ3	Q63HK5	1081 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	SASS6	Q6UVJ0	657 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	SYNE4	Q8N205	404 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	FAM184A	Q8NB25	1140 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	NECTIN2	Q92692	538 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	FUCA2	Q9BTY2	467 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	LSG1	Q9H089	658 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	FAM198A	Q9UFP1	575 aa		9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	R3HCC1	Q9Y3T6	440 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-223	ENST00000524033	UBN2	Q6ZU65	1347 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	UQCRHL	A0A096LP55	91 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	IQCA1L	A6NCM1	817 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	GADD45B	O75293	160 aa	Predicted RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	ANXA1	P04083	346 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	UQCRH	P07919	91 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	DNAJB2	P25686	324 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	AIMP1	Q12904	312 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	PROSER3	Q2NL68	480 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	CCDC183	Q5T5S1	534 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	IFFO2	Q5TF58	517 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	CC2D2B	Q6DHV5	1058 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	COPS6	Q7L5N1	327 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	LRP10	Q7Z4F1	713 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	KLRG1	Q96E93	195 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	RBM17	Q96I25	401 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	NLRP3	Q96P20	1036 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	UTP14A	Q9BVJ6	771 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	REPIN1	Q9BWE0	567 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	STK31	Q9BXU1	1019 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	USP44	Q9H0E7	712 aa		9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	LRRFIP2	Q9Y608	721 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-223	ENST00000524033	NTSR2	O95665	410 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	GRIPAP1	Q4V328	841 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	SLC10A5	Q5PT55	438 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	SLC4A10	Q6U841	1118 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	USP48	Q86UV5	1035 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	ZNF687	Q8N1G0	1237 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	XAGE3	Q8WTP9	111 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	JDP2	Q8WYK2	163 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	HS3ST6	Q96QI5	342 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	CRAMP1	Q96RY5	1269 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	PSMD1	Q99460	953 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	ZBED2	Q9BTP6	218 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	TMX4	Q9H1E5	349 aa	Predicted RBP	9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	ANO2	Q9NQ90	1003 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	SNX14	Q9Y5W7	946 aa		9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	9.32	□□□□□ -0.92
SPIDR-223	ENST00000524033	FZD9	O00144	591 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	GTF2F1	P35269	517 aa	Known RBP eCLIP	9.31	□□□□□ -0.92	2e-13	■■■■□ 26.1
SPIDR-223	ENST00000524033	IARS	P41252	1262 aa	Known RBP	9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	HSP90AB3P	Q58FF7	597 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	MTERF4	Q7Z6M4	381 aa	Known RBP	9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	JMY	Q8N9B5	988 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	BEGAIN	Q9BUH8	593 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	TAF1D	Q9H5J8	278 aa	Predicted RBP	9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	DDX21	Q9NR30	783 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	SPTLC3	Q9NUV7	552 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	BRCA1	P38398	1863 aa	Known RBP	9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	ARFGEF1	Q9Y6D6	1849 aa		9.31	□□□□□ -0.92
SPIDR-223	ENST00000524033	SCN7A	Q01118	1682 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	ABCC12	Q96J65	1359 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	LETM1	O95202	739 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	F13A1	P00488	732 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	HOXB7	P09629	217 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	ZSCAN22	P10073	491 aa	Predicted RBP	9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	ST3GAL1	Q11201	340 aa		9.3	□□□□□ -0.92
SPIDR-223	ENST00000524033	FKBP5	Q13451	457 aa	Predicted RBP	9.3	□□□□□ -0.92

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