RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 R3HDM1Q15032 1099 aaKnown RBP18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 TTC14Q96N46 770 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 PSMA5P28066 241 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 AK2P54819 239 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 MECOMQ03112 1051 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 TSGA10IPQ3SY00 556 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 PDRG1Q9NUG6 133 aa18.42■□□□□ 0.54
CTNNA1-236ENST00000522792 HAND2P61296 217 aa18.41■□□□□ 0.54
CTNNA1-236ENST00000522792 KRT32Q14532 448 aa18.41■□□□□ 0.54
CTNNA1-236ENST00000522792 STOX1Q6ZVD7 989 aa18.41■□□□□ 0.54
CTNNA1-236ENST00000522792 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
CTNNA1-236ENST00000522792 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
CTNNA1-236ENST00000522792 IL1R1P14778 569 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 MCM2P49736 904 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 BLOC1S2Q6QNY1 142 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 WDR66Q8TBY9 1149 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 NSUN4Q96CB9 384 aaKnown RBP18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 ZBTB22O15209 634 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 PRKAB2O43741 272 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 NEK1Q96PY6 1258 aa18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 ZC3H12CQ9C0D7 883 aaKnown RBP18.4■□□□□ 0.54
CTNNA1-236ENST00000522792 MAST2Q6P0Q8 1798 aa18.39■□□□□ 0.54
CTNNA1-236ENST00000522792 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 DYNLL1P63167 89 aaKnown RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 GRIK5Q16478 980 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 DOK7Q18PE1 504 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 DZIP1Q86YF9 867 aaKnown RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
CTNNA1-236ENST00000522792 E7EWF7 191 aa18.38■□□□□ 0.53
CTNNA1-236ENST00000522792 LDHBP07195 334 aaKnown RBP18.38■□□□□ 0.53
CTNNA1-236ENST00000522792 DPEP1P16444 411 aa18.38■□□□□ 0.53
CTNNA1-236ENST00000522792 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
CTNNA1-236ENST00000522792 DLEC1Q9Y238 1755 aa18.38■□□□□ 0.53
CTNNA1-236ENST00000522792 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 ZNF213O14771 459 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 POLD1P28340 1107 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 C7orf43Q8WVR3 580 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
CTNNA1-236ENST00000522792 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 C21orf2O43822 256 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 GNAT2P19087 354 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 EYA3Q99504 573 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 NAPBQ9H115 298 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 LAMA4Q16363 1823 aa18.36■□□□□ 0.53
CTNNA1-236ENST00000522792 G3V3G9 751 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 GTF2IP78347 998 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 AATFQ9NY61 560 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 TDO2P48775 406 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 MFSD14BQ5SR56 506 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
CTNNA1-236ENST00000522792 KIF13BQ9NQT8 1826 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 KCNA3P22001 575 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 DIXDC1Q155Q3 683 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 ALX1Q15699 326 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 CHD4Q14839 1912 aa18.34■□□□□ 0.53
CTNNA1-236ENST00000522792 LARGE1O95461 756 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 DDIT3P35638 169 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 TBC1D10CQ8IV04 446 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 DBNDD1Q9H9R9 158 aa18.33■□□□□ 0.53
CTNNA1-236ENST00000522792 TOB2Q14106 344 aaPredicted RBP18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 CHST3Q7LGC8 479 aa18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 PPP1R1BQ9UD71 204 aaPredicted RBP18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 ZMYM6O95789 1325 aa18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 FAM205AQ6ZU69 1335 aa18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 SNED1Q8TER0 1413 aa18.33■□□□□ 0.52
CTNNA1-236ENST00000522792 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 CUL4AQ13619 759 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 Q6ZUG5 572 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 DHX32Q7L7V1 743 aaKnown RBP18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 CHMP5Q9NZZ3 219 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 GSTO1P78417 241 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
CTNNA1-236ENST00000522792 RTFDC1Q9BY42 306 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms