RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 BCL2L12Q9HB09 334 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 EVCP57679 992 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
SMIM12-206ENST00000521580 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
SMIM12-206ENST00000521580 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
SMIM12-206ENST00000521580 PRKAB2O43741 272 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 TDO2P48775 406 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 CAMK4Q16566 473 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
SMIM12-206ENST00000521580 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
SMIM12-206ENST00000521580 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
SMIM12-206ENST00000521580 ANGEL1Q9UNK9 670 aaKnown RBP16.42■□□□□ 0.22
SMIM12-206ENST00000521580 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
SMIM12-206ENST00000521580 SALL1Q9NSC2 1324 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 RREB1Q92766 1687 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 MYH7P12883 1935 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 DACT1Q9NYF0 836 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 HPS5Q9UPZ3 1129 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 FDPSP14324 419 aaKnown RBP16.41■□□□□ 0.22
SMIM12-206ENST00000521580 CYP7A1P22680 504 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
SMIM12-206ENST00000521580 NFXL1Q6ZNB6 911 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
SMIM12-206ENST00000521580 RXRAP19793 462 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 RRP12Q5JTH9 1297 aaKnown RBP16.4■□□□□ 0.22
SMIM12-206ENST00000521580 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
SMIM12-206ENST00000521580 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.225e-8■■□□□ 13.1
SMIM12-206ENST00000521580 NEDD4P46934 1319 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 MYO5AQ9Y4I1 1855 aaKnown RBP16.4■□□□□ 0.22
SMIM12-206ENST00000521580 ALX1Q15699 326 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
SMIM12-206ENST00000521580 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
SMIM12-206ENST00000521580 MICU3Q86XE3 530 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 KDM4AO75164 1064 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMIM12-206ENST00000521580 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
SMIM12-206ENST00000521580 ZNF396Q96N95 335 aaPredicted RBP16.39■□□□□ 0.21
SMIM12-206ENST00000521580 TNMDQ9H2S6 317 aa16.39■□□□□ 0.21
SMIM12-206ENST00000521580 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
SMIM12-206ENST00000521580 GNAT2P19087 354 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 MFSD6Q6ZSS7 791 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 CKAP2LQ8IYA6 745 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
SMIM12-206ENST00000521580 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
SMIM12-206ENST00000521580 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
SMIM12-206ENST00000521580 COL4A1P02462 1669 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
SMIM12-206ENST00000521580 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
SMIM12-206ENST00000521580 RFC4P35249 363 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 TMEM87BQ96K49 555 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
SMIM12-206ENST00000521580 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 MYL10Q9BUA6 226 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 DDX19AQ9NUU7 478 aaKnown RBP16.37■□□□□ 0.21
SMIM12-206ENST00000521580 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 USP25Q9UHP3 1055 aa16.37■□□□□ 0.21
SMIM12-206ENST00000521580 NR1I2O75469 434 aa16.36■□□□□ 0.21
SMIM12-206ENST00000521580 POLR3DP05423 398 aaPredicted RBP16.36■□□□□ 0.21
SMIM12-206ENST00000521580 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
SMIM12-206ENST00000521580 CLCN1P35523 988 aa16.36■□□□□ 0.21
SMIM12-206ENST00000521580 CPLX2Q6PUV4 134 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms