RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TMPRSS13Q9BYE2 586 aa5.8□□□□□ -1.48
VPS13B-209ENST00000521559 SUGCTQ9HAC7 445 aa5.8□□□□□ -1.48
VPS13B-209ENST00000521559 RNF112Q9ULX5 631 aa5.8□□□□□ -1.48
VPS13B-209ENST00000521559 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 B3GALT4O96024 378 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 IGLV1-40P01703 118 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 BMP3P12645 472 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
VPS13B-209ENST00000521559 POU4F3Q15319 338 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 ZNF423Q2M1K9 1284 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 CORO1BQ9BR76 489 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 KCNF1Q9H3M0 494 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 ZNF576Q9H609 170 aa5.79□□□□□ -1.48
VPS13B-209ENST00000521559 TREHO43280 583 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 PREPP48147 710 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 AP3B2Q13367 1082 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 LRP8Q14114 963 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 FAM20CQ8IXL6 584 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 GIMAP7Q8NHV1 300 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 FAM83CQ9BQN1 747 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 YIPF2Q9BWQ6 316 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 ZFP64Q9NPA5 681 aa5.78□□□□□ -1.48
VPS13B-209ENST00000521559 MAOBP27338 520 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 USP11P51784 963 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 GRM2Q14416 872 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 DSC3Q14574 896 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 ARTNQ5T4W7 220 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 RNF43Q68DV7 783 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 DTHD1Q6ZMT9 781 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 BEND4Q6ZU67 534 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 FBF1Q8TES7 1133 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 C7orf69Q9H7B7 122 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 ABCB6Q9NP58 842 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 RAD18Q9NS91 495 aa5.77□□□□□ -1.49
VPS13B-209ENST00000521559 PNMA6FA0A0J9YX94 578 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 TIAF1O95411 115 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 PDIA4P13667 645 aaKnown RBP5.76□□□□□ -1.49
VPS13B-209ENST00000521559 MAP4P27816 1152 aaKnown RBP5.76□□□□□ -1.49
VPS13B-209ENST00000521559 RXRBP28702 533 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 ATP2B2Q01814 1243 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 PPP2R3AQ06190 1150 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 NFIAQ12857 509 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 ENOX2Q16206 610 aaKnown RBP5.76□□□□□ -1.49
VPS13B-209ENST00000521559 NBPF11Q86T75 865 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 TRIM42Q8IWZ5 723 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 EPS8L3Q8TE67 593 aaKnown RBP5.76□□□□□ -1.49
VPS13B-209ENST00000521559 ASB16Q96NS5 453 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 DBNDD2Q9BQY9 259 aa5.76□□□□□ -1.49
VPS13B-209ENST00000521559 GIPC1O14908 333 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 GRIK1P39086 918 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 SOX4Q06945 474 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-209ENST00000521559 ALG1LQ6GMV1 187 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 PAOXQ6QHF9 649 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 BCO2Q9BYV7 579 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 SRCIN1Q9C0H9 1055 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 NRSN2Q9GZP1 204 aa5.75□□□□□ -1.49
VPS13B-209ENST00000521559 SYNGAP1Q96PV0 1343 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 FAM95CA0A1B0GW59 222 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 HMX2A2RU54 273 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 DLGAP3O95886 979 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 MAPK8P45983 427 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 FCGRTP55899 365 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 FGD1P98174 961 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 PDE3AQ14432 1141 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS13B-209ENST00000521559 XP32Q5T750 250 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 INTS5Q6P9B9 1019 aaKnown RBP5.74□□□□□ -1.49
VPS13B-209ENST00000521559 GLIS3Q8NEA6 775 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
VPS13B-209ENST00000521559 HYAL3O43820 417 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-209ENST00000521559 COBLO75128 1261 aa5.73□□□□□ -1.49
VPS13B-209ENST00000521559 SLFN14P0C7P3 912 aa5.73□□□□□ -1.49
VPS13B-209ENST00000521559 ADH5P11766 374 aa5.73□□□□□ -1.49
VPS13B-209ENST00000521559 FMR1Q06787 632 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS13B-209ENST00000521559 TRIM56Q9BRZ2 755 aaKnown RBP5.73□□□□□ -1.49
VPS13B-209ENST00000521559 GPN3Q9UHW5 284 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-209ENST00000521559 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-209ENST00000521559 DRD2P14416 443 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 GSTT1P30711 240 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 MAP7Q14244 749 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 NFKBIBQ15653 356 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 CPSF6Q16630 551 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13B-209ENST00000521559 SGO2Q562F6 1265 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 AKAP4Q5JQC9 854 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 NXPE4Q6UWF7 544 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 DYMQ7RTS9 669 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 ZDHHC13Q8IUH4 622 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 C2CD4AQ8NCU7 369 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-209ENST00000521559 FRMD6Q96NE9 622 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 KRT82Q9NSB4 513 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 ATG3Q9NT62 314 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 PCMTD2Q9NV79 361 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 SPG7Q9UQ90 795 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 AKAP2Q9Y2D5 859 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 SAMM50Q9Y512 469 aa5.72□□□□□ -1.49
VPS13B-209ENST00000521559 AOC2O75106 756 aa5.71□□□□□ -1.5
VPS13B-209ENST00000521559 ZNF157P51786 506 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-209ENST00000521559 PI16Q6UXB8 463 aa5.71□□□□□ -1.5
VPS13B-209ENST00000521559 AEBP1Q8IUX7 1158 aa5.71□□□□□ -1.5
VPS13B-209ENST00000521559 SHKBP1Q8TBC3 707 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms