RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 KRT23Q9C075 422 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 SLC5A4Q9NY91 659 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 E9PCH4 1651 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 SDF4Q9BRK5 362 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 TGFB2P61812 414 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 PRKAG2Q9UGJ0 569 aa13.78□□□□□ -0.2
PCDHGB6-201ENST00000520790 CPDO75976 1380 aa13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 TPM2P07951 284 aa13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 WASF1Q92558 559 aa13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 MKRN1Q9UHC7 482 aaKnown RBP13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 HOOK1Q9UJC3 728 aaKnown RBP13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.2
PCDHGB6-201ENST00000520790 FLOT1O75955 427 aa13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 CERKLQ49MI3 558 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 BACH1O14867 736 aa13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 PDCP20941 246 aa13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 GRIPAP1Q4V328 841 aa13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 PNMA8AQ86V59 439 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB6-201ENST00000520790 USP17L12C9JPN9 530 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 USP17L21D6R901 530 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 BSDC1Q9NW68 430 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 ZNF532Q9HCE3 1301 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 PDE1AP54750 535 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 TTC16Q8NEE8 873 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 EDC3Q96F86 508 aaKnown RBP13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 SPDYE3A6NKU9 549 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 CCDC174Q6PII3 467 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 SAMD7Q7Z3H4 446 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 CCDC12Q8WUD4 166 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 EPS15P42566 896 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 NRXN1Q9ULB1 1477 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 UNC13BO14795 1591 aa13.76□□□□□ -0.21
PCDHGB6-201ENST00000520790 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 NEXMIFQ5QGS0 1516 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 CD2APQ9Y5K6 639 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 KDRP35968 1356 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 ADORA1P30542 326 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 MCM5P33992 734 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 GPSM2P81274 684 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 LARP1BQ659C4 914 aaKnown RBP13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 BECN2A8MW95 431 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 GDF11O95390 407 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
PCDHGB6-201ENST00000520790 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 SDR42E1Q8WUS8 393 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 GPAA1O43292 621 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 NAPAP54920 295 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 CCNA1P78396 465 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 CERS3Q8IU89 383 aa13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
PCDHGB6-201ENST00000520790 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 USH1GQ495M9 461 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 DHX37Q8IY37 1157 aaKnown RBP13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 UBA5Q9GZZ9 404 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 HMGB1P09429 215 aaKnown RBP13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ALAS1P13196 640 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 GNAQP50148 359 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 TMEM106CQ9BVX2 250 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ECE1P42892 770 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 TFAP4Q01664 338 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ZHX2Q9Y6X8 837 aa13.73□□□□□ -0.21
PCDHGB6-201ENST00000520790 ZBTB43O43298 467 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms