RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 HYPKQ9NX55 129 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 PIM2Q9P1W9 311 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 H0YIN7 160 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
MRPS28-203ENST00000518371 ADAM23O75077 832 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 GPTP24298 496 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 CHRNA5P30532 468 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 PDE6BP35913 854 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 GRM5P41594 1212 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 PRR5LQ6MZQ0 368 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 KANK3Q6NY19 840 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 C2CD5Q86YS7 1000 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 BRIP1Q9BX63 1249 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
MRPS28-203ENST00000518371 FANCIQ9NVI1 1328 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 KDM3BQ7LBC6 1761 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 YBX3P16989 372 aaKnown RBP eCLIP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 EXOSC9Q06265 439 aaKnown RBP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 HSP90AB3PQ58FF7 597 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 DALRD3Q5D0E6 543 aaKnown RBP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 LRP10Q7Z4F1 713 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 PPP1R42Q7Z4L9 355 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 BPHLQ86WA6 291 aaPredicted RBP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 ZNF34Q8IZ26 560 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 SVOPQ8N4V2 548 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 PLBD2Q8NHP8 589 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 ZNF622Q969S3 477 aaKnown RBP eCLIP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
MRPS28-203ENST00000518371 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
MRPS28-203ENST00000518371 C10orf71Q711Q0 1435 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 DDX58O95786 925 aaKnown RBP7.81□□□□□ -1.16
MRPS28-203ENST00000518371 YY1P25490 414 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 PARP10Q53GL7 1025 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 C6orf118Q5T5N4 469 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 SUSD4Q5VX71 490 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 ARHGAP27Q6ZUM4 889 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 UTP14AQ9BVJ6 771 aaKnown RBP7.81□□□□□ -1.16
MRPS28-203ENST00000518371 C1QTNF2Q9BXJ5 285 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 C4AP0C0L4 1744 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 COL24A1Q17RW2 1714 aa7.81□□□□□ -1.16
MRPS28-203ENST00000518371 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
MRPS28-203ENST00000518371 E9PSI1 815 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 VAMP4O75379 141 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 ARHGEF15O94989 841 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 KCNA3P22001 575 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 ITPKCQ96DU7 683 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
MRPS28-203ENST00000518371 TRMT112Q9UI30 125 aaKnown RBP7.8□□□□□ -1.16
MRPS28-203ENST00000518371 PXDNLA1KZ92 1463 aa7.8□□□□□ -1.16
MRPS28-203ENST00000518371 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 ZIC2O95409 532 aaPredicted RBP7.79□□□□□ -1.16
MRPS28-203ENST00000518371 MARSP56192 900 aaKnown RBP7.79□□□□□ -1.16
MRPS28-203ENST00000518371 SLFN5Q08AF3 891 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 NLRP10Q86W26 655 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 CNKSR1Q969H4 720 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 ZNF428Q96B54 188 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 MASTLQ96GX5 879 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 MYD88Q99836 296 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 KRTAP9-2Q9BYQ4 174 aa7.79□□□□□ -1.16
MRPS28-203ENST00000518371 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 MAGEB6P1A0A0J9YX57 407 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 PI4KAP2A4QPH2 592 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 SRGNP10124 158 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 NPR1P16066 1061 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 HNRNPUQ00839 825 aaKnown RBP eCLIP7.78□□□□□ -1.16
MRPS28-203ENST00000518371 NEXNQ0ZGT2 675 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 NR5A1Q13285 461 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 STYK1Q6J9G0 422 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 KSR2Q6VAB6 950 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 G2E3Q7L622 706 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 PI4KAP1Q8N8J0 262 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 WHAMMQ8TF30 809 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 ATP10DQ9P241 1426 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
MRPS28-203ENST00000518371 NTSR2O95665 410 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 FLIIQ13045 1269 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 FKBP5Q13451 457 aaPredicted RBP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 NR6A1Q15406 480 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 SLC10A5Q5PT55 438 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 TRMT44Q8IYL2 757 aaKnown RBP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 SCARF2Q96GP6 870 aaPredicted RBP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
MRPS28-203ENST00000518371 PSMG3-AS1Q96PY0 264 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 ISCA1Q9BUE6 129 aa7.77□□□□□ -1.17
MRPS28-203ENST00000518371 METTL22Q9BUU2 404 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms