RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 SLC10A5Q5PT55 438 aa23.19■■□□□ 1.3
HOXA11-202ENST00000517402 ZNF274Q96GC6 653 aaPredicted RBP23.19■■□□□ 1.3
HOXA11-202ENST00000517402 LLPHQ9BRT6 129 aaKnown RBP23.19■■□□□ 1.3
HOXA11-202ENST00000517402 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
HOXA11-202ENST00000517402 SALL1Q9NSC2 1324 aa23.19■■□□□ 1.3
HOXA11-202ENST00000517402 KLRK1P26718 216 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 KRT85P78386 507 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 MIGA1Q8NAN2 632 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 SYAP1Q96A49 352 aaPredicted RBP23.18■■□□□ 1.3
HOXA11-202ENST00000517402 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 H3BQV1 296 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 PRKAB2O43741 272 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 PDIA4P13667 645 aaKnown RBP23.18■■□□□ 1.3
HOXA11-202ENST00000517402 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 LCORLQ8N3X6 602 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 FBXL16Q8N461 479 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 LRRC4BQ9NT99 713 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 CHD4Q14839 1912 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 NEDD4P46934 1319 aa23.18■■□□□ 1.3
HOXA11-202ENST00000517402 KLF18A0A0U1RQI7 1052 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 RGL2O15211 777 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 INCENPQ9NQS7 918 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 TFIP11Q9UBB9 837 aaKnown RBP23.17■■□□□ 1.3
HOXA11-202ENST00000517402 ABCF2Q9UG63 623 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 EVCP57679 992 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 FAM196AQ6ZSG2 479 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 CYB5R4Q7L1T6 521 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 ADGRA1Q86SQ6 560 aa23.17■■□□□ 1.3
HOXA11-202ENST00000517402 GOLGA8BA8MQT2 603 aa23.16■■□□□ 1.3
HOXA11-202ENST00000517402 RESTQ13127 1097 aa23.16■■□□□ 1.3
HOXA11-202ENST00000517402 SLC51AQ86UW1 340 aa23.16■■□□□ 1.3
HOXA11-202ENST00000517402 IFNL3Q8IZI9 196 aa23.16■■□□□ 1.3
HOXA11-202ENST00000517402 TRDNQ13061 729 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 UBE4AQ14139 1066 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 TRPC5Q9UL62 973 aaPredicted RBP23.15■■□□□ 1.3
HOXA11-202ENST00000517402 HPS5Q9UPZ3 1129 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 B4E1Z4 1266 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 RFC4P35249 363 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 CTDSPL2Q05D32 466 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 CSPP1Q1MSJ5 1256 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 TPTE2Q6XPS3 522 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 NAPBQ9H115 298 aa23.15■■□□□ 1.3
HOXA11-202ENST00000517402 GSG1L2A8MUP6 293 aa23.14■■□□□ 1.3
HOXA11-202ENST00000517402 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.3
HOXA11-202ENST00000517402 ONECUT3O60422 494 aaPredicted RBP23.14■■□□□ 1.3
HOXA11-202ENST00000517402 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.3
HOXA11-202ENST00000517402 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.3
HOXA11-202ENST00000517402 TACC3Q9Y6A5 838 aa23.14■■□□□ 1.3
HOXA11-202ENST00000517402 MYH15Q9Y2K3 1946 aa23.14■■□□□ 1.3
HOXA11-202ENST00000517402 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.29
HOXA11-202ENST00000517402 NPHP1O15259 732 aa23.14■■□□□ 1.29
HOXA11-202ENST00000517402 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.29
HOXA11-202ENST00000517402 GUCY1B3Q02153 619 aa23.14■■□□□ 1.29
HOXA11-202ENST00000517402 VPS37DQ86XT2 251 aa23.14■■□□□ 1.29
HOXA11-202ENST00000517402 RNF214Q8ND24 703 aa23.14■■□□□ 1.29
HOXA11-202ENST00000517402 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.29
HOXA11-202ENST00000517402 CCDC183Q5T5S1 534 aa23.13■■□□□ 1.29
HOXA11-202ENST00000517402 SENP2Q9HC62 589 aa23.13■■□□□ 1.29
HOXA11-202ENST00000517402 SLC4A4Q9Y6R1 1079 aa23.13■■□□□ 1.29
HOXA11-202ENST00000517402 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
HOXA11-202ENST00000517402 CAVIN4Q5BKX8 364 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 TRAPPC3LQ5T215 181 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 RAI14Q9P0K7 980 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 MYH13Q9UKX3 1938 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 CYP7A1P22680 504 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 SPATA32Q96LK8 384 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 ZMYM6O95789 1325 aa23.12■■□□□ 1.29
HOXA11-202ENST00000517402 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 ALX1Q15699 326 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 STK11IPQ8N1F8 1099 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 GNL3LQ9NVN8 582 aaKnown RBP23.11■■□□□ 1.29
HOXA11-202ENST00000517402 WDR19Q8NEZ3 1342 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 RXRAP19793 462 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 TM4SF1P30408 202 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 TDO2P48775 406 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 NFIXQ14938 502 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 LEO1Q8WVC0 666 aaPredicted RBP23.11■■□□□ 1.29
HOXA11-202ENST00000517402 TSPY26PQ9H489 355 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
HOXA11-202ENST00000517402 ELP1O95163 1332 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 PNPLA7Q6ZV29 1317 aa23.11■■□□□ 1.29
HOXA11-202ENST00000517402 SH2B2O14492 632 aaPredicted RBP23.1■■□□□ 1.29
HOXA11-202ENST00000517402 NAA16Q6N069 864 aaPredicted RBP23.1■■□□□ 1.29
HOXA11-202ENST00000517402 FTOQ9C0B1 505 aaKnown RBP eCLIP23.1■■□□□ 1.29
HOXA11-202ENST00000517402 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
HOXA11-202ENST00000517402 UBR3Q6ZT12 1888 aa23.1■■□□□ 1.29
HOXA11-202ENST00000517402 SDR42E1Q8WUS8 393 aa23.09■■□□□ 1.29
HOXA11-202ENST00000517402 SCAND2PQ9GZW5 306 aaPredicted RBP23.09■■□□□ 1.29
HOXA11-202ENST00000517402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
HOXA11-202ENST00000517402 CEBPZQ03701 1054 aaKnown RBP23.09■■□□□ 1.29
HOXA11-202ENST00000517402 OTUD7BQ6GQQ9 843 aa23.09■■□□□ 1.29
HOXA11-202ENST00000517402 QTRT2Q9H974 415 aaKnown RBP23.09■■□□□ 1.29
HOXA11-202ENST00000517402 KIF3AQ9Y496 699 aa23.09■■□□□ 1.29
HOXA11-202ENST00000517402 BRWD3Q6RI45 1802 aa23.08■■□□□ 1.29
HOXA11-202ENST00000517402 KDM4AO75164 1064 aa23.08■■□□□ 1.29
HOXA11-202ENST00000517402 ZNF384Q8TF68 577 aa23.08■■□□□ 1.29
HOXA11-202ENST00000517402 ZSCAN16Q9H4T2 348 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms