RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 IRS2Q9Y4H2 1338 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 PDIA4P13667 645 aaKnown RBP18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 GNAT2P19087 354 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 SCRN1Q12765 414 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 RAI14Q9P0K7 980 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 GSG1L2A8MUP6 293 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 POLRMTO00411 1230 aaKnown RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 APBA3O96018 575 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 PDCP20941 246 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 CYP7A1P22680 504 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 LARP1BQ659C4 914 aaKnown RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 PRC1O43663 620 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 RXRBP28702 533 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 EVCP57679 992 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 ANTXR2P58335 489 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 ADGRA1Q86SQ6 560 aa18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
THUMPD3-210ENST00000515662 PRKAB2O43741 272 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 JAK2O60674 1132 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 MIGA1Q8NAN2 632 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 LLPHQ9BRT6 129 aaKnown RBP18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 ZBTB22O15209 634 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 NAPBQ9H115 298 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
THUMPD3-210ENST00000515662 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 TRDNQ13061 729 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 GPT2Q8TD30 523 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
THUMPD3-210ENST00000515662 XDHP47989 1333 aa18.21■□□□□ 0.51
THUMPD3-210ENST00000515662 MAGEB6P1A0A0J9YX57 407 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 NSUN7Q8NE18 718 aaKnown RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 ZNF384Q8TF68 577 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 FSD2A1L4K1 749 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 CTDNEP1O95476 244 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 NAA16Q6N069 864 aaPredicted RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 NKX2-3Q8TAU0 364 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 MYH13Q9UKX3 1938 aa18.2■□□□□ 0.5
THUMPD3-210ENST00000515662 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 NCLP19338 710 aaKnown RBP18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 TDO2P48775 406 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 TMEM87AQ8NBN3 555 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 TIAM2Q8IVF5 1701 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 NEDD4P46934 1319 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 USP48Q86UV5 1035 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
THUMPD3-210ENST00000515662 GPSM2P81274 684 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 B4E1Z4 1266 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 BBOX1O75936 387 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 MECOMQ03112 1051 aa18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
THUMPD3-210ENST00000515662 KLF18A0A0U1RQI7 1052 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 MBD3O95983 291 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 HMGN5P82970 282 aaKnown RBP18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 AKNAD1Q5T1N1 836 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 INCENPQ9NQS7 918 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 TACC3Q9Y6A5 838 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 ANGEL1Q9UNK9 670 aaKnown RBP18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
THUMPD3-210ENST00000515662 SALL1Q9NSC2 1324 aa18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
THUMPD3-210ENST00000515662 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms