RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
CPNE4-213ENST00000515418 CHD4Q14839 1912 aa10.91□□□□□ -0.66
CPNE4-213ENST00000515418 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
CPNE4-213ENST00000515418 C15orf52Q6ZUT6 534 aaKnown RBP10.91□□□□□ -0.66
CPNE4-213ENST00000515418 TMC4Q7Z404 712 aa10.91□□□□□ -0.66
CPNE4-213ENST00000515418 NSUN4Q96CB9 384 aaKnown RBP10.91□□□□□ -0.66
CPNE4-213ENST00000515418 RPAP1Q9BWH6 1393 aaPredicted RBP10.91□□□□□ -0.66
CPNE4-213ENST00000515418 E7EWF7 191 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 PSMA5P28066 241 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 DYNLL1P63167 89 aaKnown RBP10.9□□□□□ -0.66
CPNE4-213ENST00000515418 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.66
CPNE4-213ENST00000515418 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 STYK1Q6J9G0 422 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 NAA16Q6N069 864 aaPredicted RBP10.9□□□□□ -0.66
CPNE4-213ENST00000515418 BLOC1S2Q6QNY1 142 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 LRRC2Q9BYS8 371 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 GSG1L2A8MUP6 293 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
CPNE4-213ENST00000515418 IL1R1P14778 569 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 RPS6KB1P23443 525 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 DDIT3P35638 169 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 NBR1Q14596 966 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 CHST3Q7LGC8 479 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 TMX4Q9H1E5 349 aaPredicted RBP10.9□□□□□ -0.66
CPNE4-213ENST00000515418 INCENPQ9NQS7 918 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 SLC4A4Q9Y6R1 1079 aa10.9□□□□□ -0.66
CPNE4-213ENST00000515418 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 ZNF213O14771 459 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 LARGE1O95461 756 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 MCM2P49736 904 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 KRT32Q14532 448 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 IMMTQ16891 758 aaKnown RBP10.89□□□□□ -0.67
CPNE4-213ENST00000515418 IFNL3Q8IZI9 196 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 SDR42E1Q8WUS8 393 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.67
CPNE4-213ENST00000515418 ZC3H12CQ9C0D7 883 aaKnown RBP10.89□□□□□ -0.67
CPNE4-213ENST00000515418 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
CPNE4-213ENST00000515418 KCNQ5Q9NR82 932 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 LIMCH1Q9UPQ0 1083 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 LRRC37AA6NMS7 1700 aa10.89□□□□□ -0.67
CPNE4-213ENST00000515418 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 DIXDC1Q155Q3 683 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 STK11IPQ8N1F8 1099 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 NKX2-3Q8TAU0 364 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 C7orf43Q8WVR3 580 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 CNKSR1Q969H4 720 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 RIOK1Q9BRS2 568 aaKnown RBP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 TPCN1Q9ULQ1 816 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 SMIM22K7EJ46 135 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 C21orf2O43822 256 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 DPEP1P16444 411 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 GTF2IP78347 998 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 AATFQ9NY61 560 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPNE4-213ENST00000515418 CHMP5Q9NZZ3 219 aa10.88□□□□□ -0.67
CPNE4-213ENST00000515418 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 KCNA3P22001 575 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 SPTY2D1Q68D10 685 aaPredicted RBP10.87□□□□□ -0.67
CPNE4-213ENST00000515418 Q6ZUG5 572 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 DZIP1Q86YF9 867 aaKnown RBP10.87□□□□□ -0.67
CPNE4-213ENST00000515418 TBC1D10CQ8IV04 446 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 NECAB1Q8N987 351 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 NAPBQ9H115 298 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 DUOX1Q9NRD9 1551 aa10.87□□□□□ -0.67
CPNE4-213ENST00000515418 CUL4AQ13619 759 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 ALX1Q15699 326 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 ME3Q16798 604 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 MFSD14BQ5SR56 506 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 DHX32Q7L7V1 743 aaKnown RBP10.86□□□□□ -0.67
CPNE4-213ENST00000515418 DBNDD1Q9H9R9 158 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
CPNE4-213ENST00000515418 PPP1R1BQ9UD71 204 aaPredicted RBP10.86□□□□□ -0.67
CPNE4-213ENST00000515418 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 BAZ2AQ9UIF9 1905 aaKnown RBP10.86□□□□□ -0.67
CPNE4-213ENST00000515418 SALL1Q9NSC2 1324 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 G3V3G9 751 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 TDO2P48775 406 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
CPNE4-213ENST00000515418 STK3Q13188 491 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 PKP1Q13835 747 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 COA1Q9GZY4 146 aa10.86□□□□□ -0.67
CPNE4-213ENST00000515418 MYH2Q9UKX2 1941 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
CPNE4-213ENST00000515418 F8W031 263 aaPredicted RBP10.85□□□□□ -0.67
CPNE4-213ENST00000515418 GNAT2P19087 354 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms