RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 MICALCLQ6ZW33 695 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 KRT2P35908 639 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 SP4Q02446 784 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 MAATS1Q7Z4T9 603 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 CCDC155Q8N6L0 562 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 ARHGEF10LQ9HCE6 1279 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 ZBTB21Q9ULJ3 1066 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 MAP3K5Q99683 1374 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 CALCOCO1Q9P1Z2 691 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 CHMLP26374 656 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 H0YIN7 160 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
TRIM41-207ENST00000515223 UBASH3AP57075 661 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 ZNF445P59923 1031 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 ZSWIM4Q9H7M6 989 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 SUPT20HQ8NEM7 779 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 LMBR1Q8WVP7 490 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 PA2G4Q9UQ80 394 aaKnown RBP18.11■□□□□ 0.49
TRIM41-207ENST00000515223 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
TRIM41-207ENST00000515223 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
TRIM41-207ENST00000515223 EEF2P13639 858 aaKnown RBP18.1■□□□□ 0.49
TRIM41-207ENST00000515223 KRT222Q8N1A0 295 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 LARGE2Q8N3Y3 721 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 CEP112Q8N8E3 955 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 IP6K1Q92551 441 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 CCDC77Q9BR77 488 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 RASAL2Q9UJF2 1139 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 BICDL2A1A5D9 508 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 NDC80O14777 642 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 ZNF710Q8N1W2 664 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 RAB3IL1Q8TBN0 382 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 INSRP06213 1382 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 ZBTB9Q96C00 473 aa18.1■□□□□ 0.49
TRIM41-207ENST00000515223 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
TRIM41-207ENST00000515223 TRPM2O94759 1503 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 AOPEPQ8N6M6 819 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
TRIM41-207ENST00000515223 GNG11P61952 73 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
TRIM41-207ENST00000515223 HSP90AA4PQ58FG1 418 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 A0A1W2PRG0 241 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
TRIM41-207ENST00000515223 BAG6P46379 1132 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 DTHD1Q6ZMT9 781 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 KCNA6P17658 529 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 C6orf163Q5TEZ5 329 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 DHX58Q96C10 678 aa18.09■□□□□ 0.49
TRIM41-207ENST00000515223 SOS1Q07889 1333 aaPredicted RBP18.09■□□□□ 0.49
TRIM41-207ENST00000515223 ADGRL2O95490 1459 aa18.08■□□□□ 0.49
TRIM41-207ENST00000515223 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.49
TRIM41-207ENST00000515223 JAG2Q9Y219 1238 aa18.08■□□□□ 0.49
TRIM41-207ENST00000515223 TBX22Q9Y458 520 aa18.08■□□□□ 0.49
TRIM41-207ENST00000515223 PLCB3Q01970 1234 aa18.08■□□□□ 0.49
TRIM41-207ENST00000515223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.08■□□□□ 0.49
TRIM41-207ENST00000515223 TMEM63CQ9P1W3 806 aa18.08■□□□□ 0.49
TRIM41-207ENST00000515223 SYT1P21579 422 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 SLC8A3P57103 927 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 PKP1Q13835 747 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 BMS1Q14692 1282 aaKnown RBP18.08■□□□□ 0.48
TRIM41-207ENST00000515223 CTR9Q6PD62 1173 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 CHAMP1Q96JM3 812 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 RPL13P26373 211 aaKnown RBP18.08■□□□□ 0.48
TRIM41-207ENST00000515223 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
TRIM41-207ENST00000515223 TSC1Q92574 1164 aa18.08■□□□□ 0.48
TRIM41-207ENST00000515223 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRIM41-207ENST00000515223 FMNL3Q8IVF7 1028 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 INTS4Q96HW7 963 aaKnown RBP18.07■□□□□ 0.48
TRIM41-207ENST00000515223 PUS7Q96PZ0 661 aaKnown RBP18.07■□□□□ 0.48
TRIM41-207ENST00000515223 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 DPP8Q6V1X1 898 aaPredicted RBP18.07■□□□□ 0.48
TRIM41-207ENST00000515223 DKC1O60832 514 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM41-207ENST00000515223 GJC1P36383 396 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 TFCP2Q12800 502 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 NPATQ14207 1427 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 EYA1Q99502 592 aa18.07■□□□□ 0.48
TRIM41-207ENST00000515223 TACC1O75410 805 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 SPTLC2O15270 562 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 GSTA5Q7RTV2 222 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 MAGI2Q86UL8 1455 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 RFX1P22670 979 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 RNF187Q5TA31 235 aaPredicted RBP18.06■□□□□ 0.48
TRIM41-207ENST00000515223 G2E3Q7L622 706 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 DNAI1Q9UI46 699 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 GLT8D2Q9H1C3 349 aa18.06■□□□□ 0.48
TRIM41-207ENST00000515223 HOXC9P31274 260 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms