RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 NXPE4Q6UWF7 544 aa8.36□□□□□ -1.07
PHF3-211ENST00000514822 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
PHF3-211ENST00000514822 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
PHF3-211ENST00000514822 DHX15O43143 795 aaKnown RBP8.35□□□□□ -1.07
PHF3-211ENST00000514822 P4HBP07237 508 aaKnown RBP8.35□□□□□ -1.07
PHF3-211ENST00000514822 MAOBP27338 520 aa8.35□□□□□ -1.07
PHF3-211ENST00000514822 ARMC10Q8N2F6 343 aa8.35□□□□□ -1.07
PHF3-211ENST00000514822 CORO1BQ9BR76 489 aa8.35□□□□□ -1.07
PHF3-211ENST00000514822 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
PHF3-211ENST00000514822 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
PHF3-211ENST00000514822 PREPP48147 710 aa8.34□□□□□ -1.07
PHF3-211ENST00000514822 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
PHF3-211ENST00000514822 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
PHF3-211ENST00000514822 MYRFLQ96LU7 910 aa8.34□□□□□ -1.07
PHF3-211ENST00000514822 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
PHF3-211ENST00000514822 WWC3Q9ULE0 1092 aa8.34□□□□□ -1.07
PHF3-211ENST00000514822 GIPC1O14908 333 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 GAS2O43903 313 aaKnown RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 DLGAP3O95886 979 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 FGD1P98174 961 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 FAAP100Q0VG06 881 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 GPN3Q9UHW5 284 aaPredicted RBP8.33□□□□□ -1.08
PHF3-211ENST00000514822 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 HIF3AQ9Y2N7 669 aa8.33□□□□□ -1.08
PHF3-211ENST00000514822 ANKRD33BA6NCL7 494 aa8.32□□□□□ -1.08
PHF3-211ENST00000514822 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
PHF3-211ENST00000514822 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
PHF3-211ENST00000514822 CTSBP07858 339 aa8.31□□□□□ -1.08
PHF3-211ENST00000514822 GSTT1P30711 240 aa8.31□□□□□ -1.08
PHF3-211ENST00000514822 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
PHF3-211ENST00000514822 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
PHF3-211ENST00000514822 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
PHF3-211ENST00000514822 TIAF1O95411 115 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 BMP3P12645 472 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 EAPPQ56P03 285 aaPredicted RBP8.3□□□□□ -1.08
PHF3-211ENST00000514822 ZMYM1Q5SVZ6 1142 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 FAM20CQ8IXL6 584 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 FRMD6Q96NE9 622 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 KCNF1Q9H3M0 494 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 RAD18Q9NS91 495 aa8.3□□□□□ -1.08
PHF3-211ENST00000514822 GSC2O15499 205 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 ECEL1O95672 775 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 FSTP19883 344 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 HNRNPUQ00839 825 aaKnown RBP eCLIP8.29□□□□□ -1.08
PHF3-211ENST00000514822 SOX4Q06945 474 aaPredicted RBP8.29□□□□□ -1.08
PHF3-211ENST00000514822 PDE3AQ14432 1141 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 CLEC10AQ8IUN9 316 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
PHF3-211ENST00000514822 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
PHF3-211ENST00000514822 DNAJC14Q6Y2X3 702 aaPredicted RBP8.28□□□□□ -1.08
PHF3-211ENST00000514822 BEND4Q6ZU67 534 aa8.28□□□□□ -1.08
PHF3-211ENST00000514822 C3orf58Q8NDZ4 430 aa8.28□□□□□ -1.08
PHF3-211ENST00000514822 FAM83CQ9BQN1 747 aa8.28□□□□□ -1.08
PHF3-211ENST00000514822 FAM8A1Q9UBU6 413 aa8.28□□□□□ -1.08
PHF3-211ENST00000514822 PPM1HQ9ULR3 514 aa8.28□□□□□ -1.08
PHF3-211ENST00000514822 IGLV1-40P01703 118 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 ADH5P11766 374 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 DRD2P14416 443 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 RXRBP28702 533 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 USP11P51784 963 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 AKAP4Q5JQC9 854 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 YIPF2Q9BWQ6 316 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 C7orf69Q9H7B7 122 aa8.27□□□□□ -1.09
PHF3-211ENST00000514822 HMX2A2RU54 273 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 GSTP1P09211 210 aaKnown RBP8.26□□□□□ -1.09
PHF3-211ENST00000514822 MAP4P27816 1152 aaKnown RBP8.26□□□□□ -1.09
PHF3-211ENST00000514822 GNA15P30679 374 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 SGO2Q562F6 1265 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 NPAS4Q8IUM7 802 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 CEP44Q9C0F1 390 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 AP4E1Q9UPM8 1137 aa8.26□□□□□ -1.09
PHF3-211ENST00000514822 AOC2O75106 756 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 NFIAQ12857 509 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 SULF2Q8IWU5 870 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
PHF3-211ENST00000514822 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
PHF3-211ENST00000514822 WDR18Q9BV38 432 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 EMILIN2Q9BXX0 1053 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 ZC3H12CQ9C0D7 883 aaKnown RBP8.25□□□□□ -1.09
PHF3-211ENST00000514822 KRT82Q9NSB4 513 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 SYNGAP1Q96PV0 1343 aa8.25□□□□□ -1.09
PHF3-211ENST00000514822 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
PHF3-211ENST00000514822 LIG1P18858 919 aa8.24□□□□□ -1.09
PHF3-211ENST00000514822 ERCC3P19447 782 aa8.24□□□□□ -1.09
PHF3-211ENST00000514822 NME2P22392 152 aa8.24□□□□□ -1.09
PHF3-211ENST00000514822 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
PHF3-211ENST00000514822 RNF43Q68DV7 783 aa8.24□□□□□ -1.09
PHF3-211ENST00000514822 DYMQ7RTS9 669 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms