RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 INHAP05111 366 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 HMOX1P09601 288 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 CNGB1Q14028 1251 aaPredicted RBP9.27□□□□□ -0.93
RFC1-215ENST00000512881 TRAPPC3LQ5T215 181 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
RFC1-215ENST00000512881 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.93
RFC1-215ENST00000512881 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 PKD1L3Q7Z443 1732 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 KDM6AO15550 1401 aaPredicted RBP9.26□□□□□ -0.93
RFC1-215ENST00000512881 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
RFC1-215ENST00000512881 YBX3P16989 372 aaKnown RBP eCLIP9.26□□□□□ -0.93
RFC1-215ENST00000512881 GSK3AP49840 483 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 AKAP4Q5JQC9 854 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 LGR6Q9HBX8 967 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
RFC1-215ENST00000512881 RAD21O60216 631 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
RFC1-215ENST00000512881 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 TOGARAM1Q9Y4F4 1720 aa9.25□□□□□ -0.93
RFC1-215ENST00000512881 RNMTO43148 476 aaKnown RBP9.24□□□□□ -0.93
RFC1-215ENST00000512881 MMP10P09238 476 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 SKIP12755 728 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
RFC1-215ENST00000512881 RFC4P35249 363 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
RFC1-215ENST00000512881 ZNF295-AS1Q8N0V1 137 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 NLGN1Q8N2Q7 840 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 SLC52A2Q9HAB3 445 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 CNTNAP4Q9C0A0 1308 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
RFC1-215ENST00000512881 C4BP0C0L5 1744 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 QSER1Q2KHR3 1735 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
RFC1-215ENST00000512881 CELA2BP08218 269 aaPredicted RBP9.23□□□□□ -0.93
RFC1-215ENST00000512881 MSX1P28360 303 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 PLA2G4AP47712 749 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 NCOA4Q13772 614 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 EML3Q32P44 896 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 UCN2Q96RP3 112 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 RUBCNLQ9H714 662 aa9.23□□□□□ -0.93
RFC1-215ENST00000512881 USP17L5A8MUK1 530 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 GYS1P13807 737 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 CRKLP46109 303 aaKnown RBP9.22□□□□□ -0.93
RFC1-215ENST00000512881 SMTNP53814 917 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 KCNMA1Q12791 1236 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
RFC1-215ENST00000512881 USP3Q9Y6I4 520 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 C5P01031 1676 aa9.22□□□□□ -0.93
RFC1-215ENST00000512881 ATP4AP20648 1035 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 GTF2IP78347 998 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 LBRQ14739 615 aaKnown RBP9.21□□□□□ -0.94
RFC1-215ENST00000512881 MTFR1Q15390 333 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 INTS5Q6P9B9 1019 aaKnown RBP9.21□□□□□ -0.94
RFC1-215ENST00000512881 DNAJC10Q8IXB1 793 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 WWC3Q9ULE0 1092 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 COL24A1Q17RW2 1714 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 ITGB4P16144 1822 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 TUBGCP6Q96RT7 1819 aa9.21□□□□□ -0.94
RFC1-215ENST00000512881 LZTS3O60299 673 aaPredicted RBP9.2□□□□□ -0.94
RFC1-215ENST00000512881 MX2P20592 715 aa9.2□□□□□ -0.94
RFC1-215ENST00000512881 CFAP53Q96M91 514 aa9.2□□□□□ -0.94
RFC1-215ENST00000512881 CRISPLD1Q9H336 500 aa9.2□□□□□ -0.94
RFC1-215ENST00000512881 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
RFC1-215ENST00000512881 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
RFC1-215ENST00000512881 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
RFC1-215ENST00000512881 A0A0G2JLW4 131 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
RFC1-215ENST00000512881 TGFB2P61812 414 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 DEPDC4Q8N2C3 294 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 IL17REQ8NFR9 667 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 GAS2L2Q8NHY3 880 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 ACDQ96AP0 544 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 PHACTR3Q96KR7 559 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 CFHR5Q9BXR6 569 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 CCDC87Q9NVE4 849 aa9.19□□□□□ -0.94
RFC1-215ENST00000512881 A6NJY4 79 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 GNAT3A8MTJ3 354 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
RFC1-215ENST00000512881 DPEP1P16444 411 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 PPP2R1AP30153 589 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 C1QTNF8P60827 252 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 TBC1D9Q6ZT07 1266 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 TAF1LQ8IZX4 1826 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 NIFKQ9BYG3 293 aaKnown RBP9.18□□□□□ -0.94
RFC1-215ENST00000512881 DNAAF2Q9NVR5 837 aaKnown RBP9.18□□□□□ -0.94
RFC1-215ENST00000512881 NUDCQ9Y266 331 aa9.18□□□□□ -0.94
RFC1-215ENST00000512881 SOS1Q07889 1333 aaPredicted RBP9.17□□□□□ -0.94
RFC1-215ENST00000512881 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms