RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	NDUFB5	O43674	189 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	MAOB	P27338	520 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	ZNF157	P51786	506 aa	Predicted RBP	4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	UVSSA	Q2YD98	709 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	PI16	Q6UXB8	463 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	SHKBP1	Q8TBC3	707 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	TMC1	Q8TDI8	760 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	FBLIM1	Q8WUP2	373 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	CCDC74A	Q96AQ1	378 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	MFSD14A	Q96MC6	490 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	FMNL2	Q96PY5	1086 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	TRIM56	Q9BRZ2	755 aa	Known RBP	4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	EHD4	Q9H223	541 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	SUGCT	Q9HAC7	445 aa		4.62	□□□□□ -1.67
PDGFC-208	ENST00000512711	SOWAHD	A6NJG2	315 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	WDR64	B1ANS9	1081 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	COBL	O75128	1261 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	CPNE3	O75131	537 aa	Known RBP	4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	HOXA10	P31260	410 aa	Predicted RBP	4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	ADM	P35318	185 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	SOX4	Q06945	474 aa	Predicted RBP	4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	PDE3B	Q13370	1112 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	B4GALNT3	Q6L9W6	998 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	GLIS3	Q8NEA6	775 aa		4.61	□□□□□ -1.67
PDGFC-208	ENST00000512711	F13B	P05160	661 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	RXRB	P28702	533 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	FAAP100	Q0VG06	881 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	POU4F3	Q15319	338 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	NFKBIB	Q15653	356 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	TMC7	Q7Z402	723 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	FBXL6	Q8N531	539 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	CITED4	Q96RK1	184 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	DBNDD2	Q9BQY9	259 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	ZNF576	Q9H609	170 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	CYP4F12	Q9HCS2	524 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	ABCB6	Q9NP58	842 aa		4.6	□□□□□ -1.67
PDGFC-208	ENST00000512711	TMEM238L	A0A1B0GVL6	79 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	GSC2	O15499	205 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	GAS2	O43903	313 aa	Known RBP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	B3GALT4	O96024	378 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	YBX3	P16989	372 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	TAL1	P17542	331 aa	Predicted RBP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	ITPKA	P23677	461 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	IRAK1	P51617	712 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	USP11	P51784	963 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	GRM2	Q14416	872 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	CCER1	Q8TC90	406 aa	Predicted RBP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	WDR89	Q96FK6	387 aa	Predicted RBP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	CSRNP1	Q96S65	589 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	RBCK1	Q9BYM8	510 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	PPP1R9A	Q9ULJ8	1098 aa		4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	OAS3	Q9Y6K5	1087 aa	Known RBP	4.59	□□□□□ -1.67
PDGFC-208	ENST00000512711	FAM95C	A0A1B0GW59	222 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	DYNC1LI2	O43237	492 aa	Predicted RBP	4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	GADD45B	O75293	160 aa	Predicted RBP	4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	CYP11A1	P05108	521 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	NEFL	P07196	543 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	NFIC	P08651	508 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	AKAP4	Q5JQC9	854 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	LCE1D	Q5T752	114 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	DNAJC25	Q9H1X3	360 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	LGR6	Q9HBX8	967 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	FAM105A	Q9NUU6	356 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	BIN2	Q9UBW5	565 aa	Predicted RBP	4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	HIF3A	Q9Y2N7	669 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	ACTL7B	Q9Y614	415 aa		4.58	□□□□□ -1.68
PDGFC-208	ENST00000512711	AOC2	O75106	756 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	ADH5	P11766	374 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	LIG1	P18858	919 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	SPINK2	P20155	84 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	DSC3	Q14574	896 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	DYM	Q7RTS9	669 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	DTX1	Q86Y01	620 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	STK35	Q8TDR2	534 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	EZH1	Q92800	747 aa	Predicted RBP	4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	GATA6	Q92908	595 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	SETDB2	Q96T68	719 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	KRTAP4-7	Q9BYR0	210 aa		4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	GNE	Q9Y223	722 aa	Known RBP	4.57	□□□□□ -1.68
PDGFC-208	ENST00000512711	FAM170B	A6NMN3	283 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	BRD1	O95696	1058 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	GP2	P55259	537 aa	Known RBP	4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	FCGRT	P55899	365 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	PLCB3	Q01970	1234 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	NXPE4	Q6UWF7	544 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	ALKBH8	Q96BT7	664 aa	Known RBP	4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	WDR18	Q9BV38	432 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	SEMA6C	Q9H3T2	930 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	CCDC86	Q9H6F5	360 aa	Known RBP	4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	RAD18	Q9NS91	495 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	PRKAG2	Q9UGJ0	569 aa		4.56	□□□□□ -1.68
PDGFC-208	ENST00000512711	ZNF862	O60290	1169 aa		4.55	□□□□□ -1.68
PDGFC-208	ENST00000512711	RAB6A	P20340	208 aa		4.55	□□□□□ -1.68
PDGFC-208	ENST00000512711	ASPA	P45381	313 aa		4.55	□□□□□ -1.68
PDGFC-208	ENST00000512711	PTPN12	Q05209	780 aa	Known RBP	4.55	□□□□□ -1.68

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