RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 USP44Q9H0E7 712 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 MEGF6O75095 1541 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 RAD17O75943 681 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 BTDP43251 543 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 IREB2P48200 963 aaKnown RBP5.96□□□□□ -1.45
PHF3-210ENST00000509876 BRPF1P55201 1214 aaPredicted RBP5.96□□□□□ -1.45
PHF3-210ENST00000509876 CCDC102BQ68D86 513 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 TGFBRAP1Q8WUH2 860 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 CRAMP1Q96RY5 1269 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 TNNQ9UQP3 1299 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 WDR33Q9C0J8 1336 aaKnown RBP5.96□□□□□ -1.45
PHF3-210ENST00000509876 IARSP41252 1262 aaKnown RBP5.96□□□□□ -1.45
PHF3-210ENST00000509876 NWD1Q149M9 1564 aa5.96□□□□□ -1.45
PHF3-210ENST00000509876 PARP1P09874 1014 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 MATR3P43243 847 aaKnown RBP eCLIP5.96□□□□□ -1.467e-7■■□□□ 14.2
PHF3-210ENST00000509876 TGFB2P61812 414 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 MAPKAPK5Q8IW41 473 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 C2orf69Q8N8R5 385 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 SMCR8Q8TEV9 937 aaPredicted RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 COPRSQ9NQ92 184 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 RBM28Q9NW13 759 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 PXDNQ92626 1479 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ECE2O60344 883 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 IGHDP01880 384 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ZAP70P43403 619 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 HOMER1Q86YM7 354 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 PCDHB15Q9Y5E8 787 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 H7C1W4 665 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 PLSCR1O15162 318 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ZBTB43O43298 467 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ITPK1Q13572 414 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 RTN1Q16799 776 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 DNTTIP2Q5QJE6 756 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 SASS6Q6UVJ0 657 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 C8orf76Q96K31 380 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 DNAI2Q9GZS0 605 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 DDX49Q9Y6V7 483 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 COL14A1Q05707 1796 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 USP42Q9H9J4 1324 aaKnown RBP5.96□□□□□ -1.46
PHF3-210ENST00000509876 LRRC24Q50LG9 513 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 MICU3Q86XE3 530 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ZHX3Q9H4I2 956 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 CCDC39Q9UFE4 941 aa5.96□□□□□ -1.46
PHF3-210ENST00000509876 ZNF532Q9HCE3 1301 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 PNMA6EA0A0J9YXQ4 647 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 ATP5JP18859 108 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 TRIM21P19474 475 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 TBC1D9Q6ZT07 1266 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 SSH3Q8TE77 659 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 CFAP45Q9UL16 551 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 RBM8AQ9Y5S9 174 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 CAMTA2O94983 1202 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 EIF5P55010 431 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 ESYT1Q9BSJ8 1104 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 NAT10Q9H0A0 1025 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 IBTKQ9P2D0 1353 aaPredicted RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 USP17L8P0C7I0 530 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 CHRNA5P30532 468 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 STIM1Q13586 685 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 BRDTQ58F21 947 aaPredicted RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 KINO60870 393 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 SSBP05455 408 aaKnown RBP eCLIP5.95□□□□□ -1.46
PHF3-210ENST00000509876 OSBPP22059 807 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 PRR5LQ6MZQ0 368 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 GADL1Q6ZQY3 521 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 PODNQ7Z5L7 613 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 COL23A1Q86Y22 540 aaPredicted RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 KBTBD3Q8NAB2 608 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 DDX11Q96FC9 970 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 ZNF277Q9NRM2 450 aaPredicted RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 XRN1Q8IZH2 1706 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 AOC3Q16853 763 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 HEATR3Q7Z4Q2 680 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 APOBEC3FQ8IUX4 373 aaKnown RBP5.95□□□□□ -1.46
PHF3-210ENST00000509876 CCDC82Q8N4S0 544 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 TTLL11Q8NHH1 800 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 C6orf50Q9HD87 102 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 PNMA2Q9UL42 364 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 LIMCH1Q9UPQ0 1083 aa5.95□□□□□ -1.46
PHF3-210ENST00000509876 KLF18A0A0U1RQI7 1052 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 PRC1O43663 620 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 SDF4Q9BRK5 362 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 ISCA1Q9BUE6 129 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 SLC26A6Q9BXS9 759 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 SPDYE3A6NKU9 549 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 GPAA1O43292 621 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 DPEP1P16444 411 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 CCDC83Q8IWF9 413 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 NAPAP54920 295 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 TMED8Q6PL24 325 aaPredicted RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 CEP57L1Q8IYX8 460 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 NAP1L4Q99733 375 aaKnown RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 GPBP1L1Q9HC44 474 aaPredicted RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 SWAP70Q9UH65 585 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 HACL1Q9UJ83 578 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 USP14P54578 494 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 CEBPZQ03701 1054 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 402.3 ms