RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 SHANK3Q9BYB0 1731 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 ABCA3Q99758 1704 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SNAP23O00161 211 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 FOXP2O15409 715 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 STK38Q15208 465 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ZNF512BQ96KM6 892 aaPredicted RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ZNF75DP51815 510 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SIK1P57059 783 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ARID5BQ14865 1188 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 IQCB1Q15051 598 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 MAGEB6Q8N7X4 407 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ERCC4Q92889 916 aaPredicted RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 NAPBQ9H115 298 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ZNF165P49910 485 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 ZRSR1Q15695 479 aaKnown RBP12.78□□□□□ -0.36
SEC31A-228ENST00000509142 MAP7D2Q96T17 732 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
SEC31A-228ENST00000509142 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.36
SEC31A-228ENST00000509142 PARP10Q53GL7 1025 aa12.77□□□□□ -0.36
SEC31A-228ENST00000509142 FSIP1Q8NA03 581 aa12.77□□□□□ -0.36
SEC31A-228ENST00000509142 SPEF2Q9C093 1822 aa12.77□□□□□ -0.36
SEC31A-228ENST00000509142 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
SEC31A-228ENST00000509142 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
SEC31A-228ENST00000509142 AK7Q96M32 723 aa12.77□□□□□ -0.37
SEC31A-228ENST00000509142 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
SEC31A-228ENST00000509142 B4E1Z4 1266 aa12.77□□□□□ -0.37
SEC31A-228ENST00000509142 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
SEC31A-228ENST00000509142 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
SEC31A-228ENST00000509142 METAP2P50579 478 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC31A-228ENST00000509142 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
SEC31A-228ENST00000509142 NWD2Q9ULI1 1742 aa12.77□□□□□ -0.37
SEC31A-228ENST00000509142 CTAGE5O15320 804 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
SEC31A-228ENST00000509142 ANTXR2P58335 489 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 MBD4O95243 580 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 RXRAP19793 462 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 EVCP57679 992 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
SEC31A-228ENST00000509142 MICU3Q86XE3 530 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 CDKL5O76039 1030 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 TPM3P06753 285 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
SEC31A-228ENST00000509142 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
SEC31A-228ENST00000509142 BECN2A8MW95 431 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 TDO2P48775 406 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 ENGASEQ8NFI3 743 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 ITGB4P16144 1822 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 TMEM67Q5HYA8 995 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
SEC31A-228ENST00000509142 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 BCAMP50895 628 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 FBXW7Q969H0 707 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
SEC31A-228ENST00000509142 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 TRIM29Q14134 588 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 IQSEC3Q9UPP2 1182 aaPredicted RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 IFIT3O14879 490 aaKnown RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 ZBTB43O43298 467 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 CAVIN2O95810 425 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 FGFR2P21802 821 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 NAA30Q147X3 362 aaPredicted RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 MARCH10Q8NA82 808 aaPredicted RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 MRPS27Q92552 414 aaKnown RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 ALG1Q9BT22 464 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 GJB4Q9NTQ9 266 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 ABCF2Q9UG63 623 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms