RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 RXRBP28702 533 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 LRP8Q14114 963 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 POU4F3Q15319 338 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
SRPK1-207ENST00000505885 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
SRPK1-207ENST00000505885 BEND4Q6ZU67 534 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 GLIS3Q8NEA6 775 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 TRIM56Q9BRZ2 755 aaKnown RBP6.25□□□□□ -1.41
SRPK1-207ENST00000505885 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 RNF112Q9ULX5 631 aa6.25□□□□□ -1.41
SRPK1-207ENST00000505885 GSC2O15499 205 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 TREHO43280 583 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 TIAF1O95411 115 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 CYP11A1P05108 521 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 FCGRTP55899 365 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 PLCB3Q01970 1234 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 NFIAQ12857 509 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 SMG8Q8ND04 991 aaKnown RBP6.24□□□□□ -1.41
SRPK1-207ENST00000505885 CORO1BQ9BR76 489 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 TRAK1Q9UPV9 953 aa6.24□□□□□ -1.41
SRPK1-207ENST00000505885 TGFB1P01137 390 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 MAP4P27816 1152 aaKnown RBP6.23□□□□□ -1.41
SRPK1-207ENST00000505885 MAPK8P45983 427 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 DSC3Q14574 896 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 AKAP4Q5JQC9 854 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 CLEC10AQ8IUN9 316 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 DDX54Q8TDD1 881 aaKnown RBP6.23□□□□□ -1.41
SRPK1-207ENST00000505885 FAM83CQ9BQN1 747 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 TRAIPQ9BWF2 469 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 SUGCTQ9HAC7 445 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
SRPK1-207ENST00000505885 HYAL3O43820 417 aaPredicted RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 SSTR4P31391 388 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 USP11P51784 963 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 SOX4Q06945 474 aaPredicted RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 PDE3AQ14432 1141 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 ENOX2Q16206 610 aaKnown RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 RNF43Q68DV7 783 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 DBNDD2Q9BQY9 259 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 BCO2Q9BYV7 579 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 ZC3H12CQ9C0D7 883 aaKnown RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 RAD18Q9NS91 495 aa6.22□□□□□ -1.41
SRPK1-207ENST00000505885 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
SRPK1-207ENST00000505885 EIF4EBP3O60516 100 aaPredicted RBP6.21□□□□□ -1.42
SRPK1-207ENST00000505885 ADH5P11766 374 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 NXPE4Q6UWF7 544 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 NBPF11Q86T75 865 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 ZDHHC13Q8IUH4 622 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 ZSCAN29Q8IWY8 852 aaPredicted RBP6.21□□□□□ -1.42
SRPK1-207ENST00000505885 C2CD4AQ8NCU7 369 aaPredicted RBP6.21□□□□□ -1.42
SRPK1-207ENST00000505885 FBLIM1Q8WUP2 373 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 MFSD14AQ96MC6 490 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
SRPK1-207ENST00000505885 RAB6AP20340 208 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 NFKBIBQ15653 356 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
SRPK1-207ENST00000505885 HP1BP3Q5SSJ5 553 aaPredicted RBP6.2□□□□□ -1.42
SRPK1-207ENST00000505885 DYMQ7RTS9 669 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 SLC51AQ86UW1 340 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 FBXL6Q8N531 539 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 SHKBP1Q8TBC3 707 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 ASB16Q96NS5 453 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 PCMTD2Q9NV79 361 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 AKAP2Q9Y2D5 859 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 ACTL7BQ9Y614 415 aa6.2□□□□□ -1.42
SRPK1-207ENST00000505885 FAM95CA0A1B0GW59 222 aa6.19□□□□□ -1.42
SRPK1-207ENST00000505885 WDR64B1ANS9 1081 aa6.19□□□□□ -1.42
SRPK1-207ENST00000505885 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
SRPK1-207ENST00000505885 AP3B2Q13367 1082 aa6.19□□□□□ -1.42
SRPK1-207ENST00000505885 AEBP1Q8IUX7 1158 aa6.19□□□□□ -1.42
SRPK1-207ENST00000505885 WWC3Q9ULE0 1092 aa6.19□□□□□ -1.42
SRPK1-207ENST00000505885 AOC2O75106 756 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 LIG1P18858 919 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 PAOXQ6QHF9 649 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 ZFYVE1Q9HBF4 777 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 FAM105AQ9NUU6 356 aa6.18□□□□□ -1.42
SRPK1-207ENST00000505885 PRR19A6NJB7 356 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 MED26O95402 600 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 CD97P48960 835 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 SHISA5Q8N114 240 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
SRPK1-207ENST00000505885 YIPF2Q9BWQ6 316 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 CCDC86Q9H6F5 360 aaKnown RBP6.17□□□□□ -1.42
SRPK1-207ENST00000505885 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
SRPK1-207ENST00000505885 PATL2C9JE40 543 aaKnown RBP6.16□□□□□ -1.42
SRPK1-207ENST00000505885 COBLO75128 1261 aa6.16□□□□□ -1.42
SRPK1-207ENST00000505885 FBXO24O75426 580 aa6.16□□□□□ -1.42
SRPK1-207ENST00000505885 F13BP05160 661 aa6.16□□□□□ -1.42
SRPK1-207ENST00000505885 P4HBP07237 508 aaKnown RBP6.16□□□□□ -1.42
SRPK1-207ENST00000505885 NFICP08651 508 aa6.16□□□□□ -1.42
SRPK1-207ENST00000505885 GSTP1P09211 210 aaKnown RBP6.16□□□□□ -1.42
SRPK1-207ENST00000505885 XRCC5P13010 732 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms