RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KCNF1Q9H3M0 494 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 CCSER2Q9H7U1 834 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 ATG3Q9NT62 314 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 NLRP2Q9NX02 1062 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 TLR7Q9NYK1 1049 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 POLIQ9UNA4 740 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 PPME1Q9Y570 386 aa5.85□□□□□ -1.47
TRAPPC13-208ENST00000505553 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 SART1O43290 800 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 EGFRP00533 1210 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 PSAPP07602 524 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 GNA15P30679 374 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 CD68P34810 354 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 SIK1P57059 783 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 SPOCD1Q6ZMY3 1216 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 BEND4Q6ZU67 534 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 FAM20CQ8IXL6 584 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 FAM13BQ9NYF5 915 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 CCDC39Q9UFE4 941 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 WWC3Q9ULE0 1092 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 USP20Q9Y2K6 914 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 LEMD3Q9Y2U8 911 aa5.84□□□□□ -1.47
TRAPPC13-208ENST00000505553 ZBTB39O15060 712 aa5.83□□□□□ -1.48
TRAPPC13-208ENST00000505553 HOXA10P31260 410 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-208ENST00000505553 DNM1Q05193 864 aaKnown RBP5.83□□□□□ -1.48
TRAPPC13-208ENST00000505553 ATCAYQ86WG3 371 aa5.83□□□□□ -1.48
TRAPPC13-208ENST00000505553 EDEM1Q92611 657 aa5.83□□□□□ -1.48
TRAPPC13-208ENST00000505553 SMARCA5O60264 1052 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 PDGFAP04085 211 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 PRNPP04156 253 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 ZAP70P43403 619 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 PKN1Q16512 942 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 CPSF6Q16630 551 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 CSRNP1Q96S65 589 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 DNAJC25Q9H1X3 360 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 CAPN10Q9HC96 672 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 SPG7Q9UQ90 795 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 HIF3AQ9Y2N7 669 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 J3QW42 95 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 WISP1O95388 367 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 BMP3P12645 472 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 ZNF648Q5T619 568 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 AGBL5Q8NDL9 886 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 ARMC5Q96C12 935 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 CRELD1Q96HD1 420 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 PRKAG2Q9UGJ0 569 aa5.82□□□□□ -1.48
TRAPPC13-208ENST00000505553 MMP20O60882 483 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 FOSL1P15407 271 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 DUOXA2Q1HG44 320 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 MSMPQ1L6U9 139 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 ETFBKMTQ8IXQ9 262 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 GALNT11Q8NCW6 608 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 NSUN5Q96P11 429 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 RNF19AQ9NV58 838 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 KCNMB2Q9Y691 235 aa5.81□□□□□ -1.48
TRAPPC13-208ENST00000505553 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 NCLP19338 710 aaKnown RBP5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 SOX18P35713 384 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 ZNF124Q15973 351 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 ANKRD34AQ69YU3 496 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 DPH6Q7L8W6 267 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 NLRP13Q86W25 1043 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 MFSD14AQ96MC6 490 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 SETDB2Q96T68 719 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 OSBPL1AQ9BXW6 950 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 TRIM33Q9UPN9 1127 aa5.8□□□□□ -1.48
TRAPPC13-208ENST00000505553 UBAP1LF5GYI3 381 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 LINC01387J3KSC0 135 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 EIF1AYO14602 144 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 GIPC1O14908 333 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 EIF4BP23588 611 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 C8orf34Q49A92 452 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 FAM26DQ5JW98 314 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 FAM117BQ6P1L5 589 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 KIAA1211Q6ZU35 1233 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 NOP9Q86U38 636 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 ZNF654Q8IZM8 581 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 KLHL23Q8NBE8 558 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 GMLQ99445 158 aa5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 FNDC3AQ9Y2H6 1198 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-208ENST00000505553 BIN1O00499 593 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 CPNE3O75131 537 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 FARP2O94887 1054 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 HOXD8P13378 290 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 SOGA3Q5TF21 947 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 GPR152Q8TDT2 470 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 NUDT16Q96DE0 195 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 SPACA7Q96KW9 195 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
TRAPPC13-208ENST00000505553 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 ARID5AQ03989 594 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms