RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 ZNF213O14771 459 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 SEMA3EO15041 775 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 FGAP02671 866 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 MCM5P33992 734 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 PHKA1P46020 1223 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 UBE2HP62256 183 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 FGD1P98174 961 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 STOX1Q6ZVD7 989 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 PUS7LQ9H0K6 701 aaKnown RBP11.26□□□□□ -0.61
KLHL3-204ENST00000504208 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
KLHL3-204ENST00000504208 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 ZNF804BA4D1E1 1349 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 ELP1O95163 1332 aa11.26□□□□□ -0.61
KLHL3-204ENST00000504208 TCRBV5S4A2TA0A5A2 114 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
KLHL3-204ENST00000504208 CHGBP05060 677 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 PDE6AP16499 860 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 CHRNDQ07001 517 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 ZSCAN23Q3MJ62 389 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
KLHL3-204ENST00000504208 PATL2C9JE40 543 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 FOXP2O15409 715 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 TRDNQ13061 729 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 BRF1Q92994 677 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 SCAND2PQ9GZW5 306 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 KRT85P78386 507 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
KLHL3-204ENST00000504208 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 MB21D2Q8IYB1 491 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 STRBPQ96SI9 672 aaKnown RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-204ENST00000504208 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 POLD1P28340 1107 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 PI16Q6UXB8 463 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 AIDAQ96BJ3 306 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
KLHL3-204ENST00000504208 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 SCRN1Q12765 414 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 GAS2L3Q86XJ1 694 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 FAM184AQ8NB25 1140 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 ANP32BQ92688 251 aaKnown RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
KLHL3-204ENST00000504208 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 TCEANC2Q96MN5 208 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 ARFGEF1Q9Y6D6 1849 aa11.22□□□□□ -0.61
KLHL3-204ENST00000504208 NT5C2P49902 561 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
KLHL3-204ENST00000504208 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
KLHL3-204ENST00000504208 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 SALL1Q9NSC2 1324 aa11.21□□□□□ -0.61
KLHL3-204ENST00000504208 PRC1O43663 620 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 BCAMP50895 628 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 CCDC183Q5T5S1 534 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 GIMAP6Q6P9H5 292 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 FBXO33Q7Z6M2 555 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 AKAP11Q9UKA4 1901 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 H3BQV1 296 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
KLHL3-204ENST00000504208 PDE6BP35913 854 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 LIFRP42702 1097 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 RCAN1P53805 252 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
KLHL3-204ENST00000504208 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
KLHL3-204ENST00000504208 STK3Q13188 491 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms