RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 VPS37CA5D8V6 355 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 ZBTB22O15209 634 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 PRC1O43663 620 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 MBD3O95983 291 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 KLRK1P26718 216 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 PDIA3P30101 505 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 VPS37DQ86XT2 251 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 IFNL3Q8IZI9 196 aa25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 PDS5AQ29RF7 1337 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-216ENST00000503742 CACNA1SQ13698 1873 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 GSG1L2A8MUP6 293 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 GNAT2P19087 354 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 GRAPQ13588 217 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 RALYLQ86SE5 291 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 USP48Q86UV5 1035 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 GRAPLQ8TC17 118 aaPredicted RBP25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 IRS2Q9Y4H2 1338 aa25.19■■□□□ 1.62
UBE2D3-216ENST00000503742 TXNRD1Q16881 649 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 CAVIN1Q6NZI2 390 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 CDC37L1Q7L3B6 337 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 LCORLQ8N3X6 602 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 NSFL1CQ9UNZ2 370 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 CNPY2Q9Y2B0 182 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 CTDNEP1O95476 244 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 NCLP19338 710 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 NSUN7Q8NE18 718 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 GDPD2Q9HCC8 539 aa25.18■■□□□ 1.62
UBE2D3-216ENST00000503742 MYH13Q9UKX3 1938 aa25.17■■□□□ 1.62
UBE2D3-216ENST00000503742 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
UBE2D3-216ENST00000503742 GPHNQ9NQX3 736 aaPredicted RBP25.17■■□□□ 1.62
UBE2D3-216ENST00000503742 ABCF2Q9UG63 623 aa25.17■■□□□ 1.62
UBE2D3-216ENST00000503742 CYP7A1P22680 504 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 HMGB2P26583 209 aaKnown RBP25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 GAS2L3Q86XJ1 694 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 TIAM2Q8IVF5 1701 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 SERPINB2P05120 415 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 HIBADHP31937 336 aaKnown RBP25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 TRDNQ13061 729 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 CRY2Q49AN0 593 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 ADGRA1Q86SQ6 560 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 NAPBQ9H115 298 aa25.16■■□□□ 1.62
UBE2D3-216ENST00000503742 SALL1Q9NSC2 1324 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 PRKAB2O43741 272 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 ZNF445P59923 1031 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 CHMP4CQ96CF2 233 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 RAI14Q9P0K7 980 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 CHD4Q14839 1912 aa25.15■■□□□ 1.62
UBE2D3-216ENST00000503742 HMGN5P82970 282 aaKnown RBP25.14■■□□□ 1.62
UBE2D3-216ENST00000503742 ZSCAN23Q3MJ62 389 aa25.14■■□□□ 1.62
UBE2D3-216ENST00000503742 GADD45BO75293 160 aaPredicted RBP25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 XRCC6P12956 609 aaKnown RBP eCLIP25.14■■□□□ 1.614e-17■□□□□ 10.6
UBE2D3-216ENST00000503742 CCT2P78371 535 aaKnown RBP25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 DNM1Q05193 864 aaKnown RBP25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 MIGA1Q8NAN2 632 aa25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 NKX2-3Q8TAU0 364 aa25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 TFCP2L1Q9NZI6 479 aa25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 BRPF3Q9ULD4 1205 aa25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 SLC4A4Q9Y6R1 1079 aa25.14■■□□□ 1.61
UBE2D3-216ENST00000503742 MRE11P49959 708 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 TMEM63CQ9P1W3 806 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 RBM27Q9P2N5 1060 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 PTPDC1A2A3K4 754 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 ST5P78524 1137 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 CYB5R4Q7L1T6 521 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 ZNF384Q8TF68 577 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 DDX11Q96FC9 970 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 RIOK1Q9BRS2 568 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 NACAP1Q9BZK3 213 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 NCOA5Q9HCD5 579 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 LEMD3Q9Y2U8 911 aa25.13■■□□□ 1.61
UBE2D3-216ENST00000503742 PLSCR1O15162 318 aa25.12■■□□□ 1.61
UBE2D3-216ENST00000503742 TXNRD3Q86VQ6 643 aa25.12■■□□□ 1.61
UBE2D3-216ENST00000503742 NEDD4P46934 1319 aa25.12■■□□□ 1.61
UBE2D3-216ENST00000503742 DDR1Q08345 913 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 HPS5Q9UPZ3 1129 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 MAGEB6P1A0A0J9YX57 407 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 KLF18A0A0U1RQI7 1052 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 FAM184AQ8NB25 1140 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 GRPEL1Q9HAV7 217 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 TACC3Q9Y6A5 838 aa25.11■■□□□ 1.61
UBE2D3-216ENST00000503742 B4E1Z4 1266 aa25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 SH2B2O14492 632 aaPredicted RBP25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 FERMT3Q86UX7 667 aa25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 RPGRQ92834 1020 aaKnown RBP25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 NAP1L2Q9ULW6 460 aaPredicted RBP25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 ANGEL1Q9UNK9 670 aaKnown RBP25.1■■□□□ 1.61
UBE2D3-216ENST00000503742 CSPP1Q1MSJ5 1256 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 AKNAD1Q5T1N1 836 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 NAA16Q6N069 864 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 SLC51AQ86UW1 340 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 NSUN4Q96CB9 384 aaKnown RBP25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 KIF3AQ9Y496 699 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 XDHP47989 1333 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 FIBPO43427 364 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 TDO2P48775 406 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 UBE2HP62256 183 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 CTDSPL2Q05D32 466 aa25.09■■□□□ 1.61
UBE2D3-216ENST00000503742 STAG1Q8WVM7 1258 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms