RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TRDNQ13061 729 aa26.42■■□□□ 1.82
PCDH1-204ENST00000503492 EPB41L4AQ9HCS5 686 aaPredicted RBP26.42■■□□□ 1.82
PCDH1-204ENST00000503492 NARFQ9UHQ1 456 aa26.42■■□□□ 1.82
PCDH1-204ENST00000503492 PATL2C9JE40 543 aaKnown RBP26.42■■□□□ 1.82
PCDH1-204ENST00000503492 SLC10A5Q5PT55 438 aa26.42■■□□□ 1.82
PCDH1-204ENST00000503492 ARMT1Q9H993 441 aa26.42■■□□□ 1.82
PCDH1-204ENST00000503492 A0A1B0GUL6 1792 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 CARMIL3Q8ND23 1372 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 WTIPA6NIX2 430 aaPredicted RBP26.41■■□□□ 1.82
PCDH1-204ENST00000503492 LIG1P18858 919 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 GIMAP6Q6P9H5 292 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 CYB5R4Q7L1T6 521 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 GOLGA8BA8MQT2 603 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 ESPNB1AK53 854 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 BSDC1Q9NW68 430 aaPredicted RBP26.41■■□□□ 1.82
PCDH1-204ENST00000503492 NHSQ6T4R5 1651 aa26.41■■□□□ 1.82
PCDH1-204ENST00000503492 ZMYM6O95789 1325 aa26.4■■□□□ 1.82
PCDH1-204ENST00000503492 GTF2E1P29083 439 aaPredicted RBP26.4■■□□□ 1.82
PCDH1-204ENST00000503492 IFNL3Q8IZI9 196 aa26.4■■□□□ 1.82
PCDH1-204ENST00000503492 ADD1P35611 737 aaKnown RBP26.4■■□□□ 1.82
PCDH1-204ENST00000503492 RAB11FIP4Q86YS3 637 aa26.4■■□□□ 1.82
PCDH1-204ENST00000503492 FUCA2Q9BTY2 467 aa26.4■■□□□ 1.82
PCDH1-204ENST00000503492 IQSEC3Q9UPP2 1182 aaPredicted RBP26.4■■□□□ 1.82
PCDH1-204ENST00000503492 ZNF804BA4D1E1 1349 aa26.39■■□□□ 1.82
PCDH1-204ENST00000503492 SPATA31A6Q5VVP1 1343 aa26.39■■□□□ 1.82
PCDH1-204ENST00000503492 GNPATO15228 680 aa26.39■■□□□ 1.82
PCDH1-204ENST00000503492 MYH15Q9Y2K3 1946 aa26.39■■□□□ 1.81
PCDH1-204ENST00000503492 CELF1Q92879 486 aaKnown RBP26.39■■□□□ 1.81
PCDH1-204ENST00000503492 PGBD1Q96JS3 809 aa26.39■■□□□ 1.81
PCDH1-204ENST00000503492 CCNL1Q9UK58 526 aaPredicted RBP26.39■■□□□ 1.81
PCDH1-204ENST00000503492 MINPP1Q9UNW1 487 aa26.39■■□□□ 1.81
PCDH1-204ENST00000503492 GYG1P46976 350 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 GUCY1B3Q02153 619 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 NEDD4P46934 1319 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 GSG1L2A8MUP6 293 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 B4E1Z4 1266 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 UBE4AQ14139 1066 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 KLHL34Q8N239 644 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 LCORLQ8N3X6 602 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 NAPBQ9H115 298 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 LRP2BPQ9P2M1 347 aa26.38■■□□□ 1.81
PCDH1-204ENST00000503492 ANGEL1Q9UNK9 670 aaKnown RBP26.38■■□□□ 1.81
PCDH1-204ENST00000503492 GOLGA6L4A6NEF3 574 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 PRKAB2O43741 272 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 DHX16O60231 1041 aaKnown RBP26.37■■□□□ 1.81
PCDH1-204ENST00000503492 AMIGO3Q86WK7 504 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 SETDB2Q96T68 719 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 INCENPQ9NQS7 918 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 CFAP45Q9UL16 551 aa26.37■■□□□ 1.81
PCDH1-204ENST00000503492 SH2B2O14492 632 aaPredicted RBP26.36■■□□□ 1.81
PCDH1-204ENST00000503492 NYXQ9GZU5 481 aa26.36■■□□□ 1.81
PCDH1-204ENST00000503492 PNPLA7Q6ZV29 1317 aa26.36■■□□□ 1.81
PCDH1-204ENST00000503492 ZPR1O75312 459 aa26.35■■□□□ 1.81
PCDH1-204ENST00000503492 TACC3Q9Y6A5 838 aa26.35■■□□□ 1.81
PCDH1-204ENST00000503492 COL24A1Q17RW2 1714 aa26.35■■□□□ 1.81
PCDH1-204ENST00000503492 CTDSPL2Q05D32 466 aa26.35■■□□□ 1.81
PCDH1-204ENST00000503492 COL1A1P02452 1464 aaPredicted RBP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 C4AP0C0L4 1744 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 C4BP0C0L5 1744 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 CLCN1P35523 988 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 ILDR1Q86SU0 546 aaPredicted RBP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 NBPF5PQ86XG9 351 aaPredicted RBP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 DACT1Q9NYF0 836 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 RTCBQ9Y3I0 505 aaKnown RBP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 CEBPZQ03701 1054 aaKnown RBP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 MIGA1Q8NAN2 632 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 FTOQ9C0B1 505 aaKnown RBP eCLIP26.34■■□□□ 1.81
PCDH1-204ENST00000503492 NUP62CLQ9H1M0 184 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 SENP2Q9HC62 589 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 SLC4A4Q9Y6R1 1079 aa26.34■■□□□ 1.81
PCDH1-204ENST00000503492 GNAT2P19087 354 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 UVSSAQ2YD98 709 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 IGDCC4Q8TDY8 1250 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 ARHGEF1Q92888 912 aaKnown RBP26.33■■□□□ 1.81
PCDH1-204ENST00000503492 GNL3LQ9NVN8 582 aaKnown RBP26.33■■□□□ 1.81
PCDH1-204ENST00000503492 ORC3Q9UBD5 711 aaPredicted RBP26.33■■□□□ 1.81
PCDH1-204ENST00000503492 CPLX1O14810 134 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 CCDC24Q8N4L8 307 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 TMEM87BQ96K49 555 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 NLRP3Q96P20 1036 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 ABCF2Q9UG63 623 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 RCOR1Q9UKL0 485 aa26.33■■□□□ 1.81
PCDH1-204ENST00000503492 CHD4Q14839 1912 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 CYP7A1P22680 504 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 OTUD7BQ6GQQ9 843 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 ADGRA1Q86SQ6 560 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 USP28Q96RU2 1077 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 FAM84BQ96KN1 310 aaPredicted RBP26.32■■□□□ 1.8
PCDH1-204ENST00000503492 GJD4Q96KN9 370 aaPredicted RBP26.32■■□□□ 1.8
PCDH1-204ENST00000503492 TIAM2Q8IVF5 1701 aa26.32■■□□□ 1.8
PCDH1-204ENST00000503492 TAF1LQ8IZX4 1826 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 RPS8P62241 208 aaKnown RBP26.31■■□□□ 1.8
PCDH1-204ENST00000503492 CAMK4Q16566 473 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 CAVIN4Q5BKX8 364 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 BICD2Q8TD16 824 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 LY75O60449 1722 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 AKNAD1Q5T1N1 836 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 ATL3Q6DD88 541 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 APOA5Q6Q788 366 aa26.31■■□□□ 1.8
PCDH1-204ENST00000503492 C8orf76Q96K31 380 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms