RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 A0A1W2PQD8 194 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
VCAN-204ENST00000502527 TBC1D10CQ8IV04 446 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 MRPS27Q92552 414 aaKnown RBP19.32■□□□□ 0.68
VCAN-204ENST00000502527 AIDAQ96BJ3 306 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 TRIM5Q9C035 493 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 KCNF1Q9H3M0 494 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 PCDHA7Q9UN72 937 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 YEATS4O95619 227 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 ZNF75DP51815 510 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 ALX1Q15699 326 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 OTUD7BQ6GQQ9 843 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 PLA2G4DQ86XP0 818 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 SPATA5Q8NB90 893 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
VCAN-204ENST00000502527 KIAA1524Q8TCG1 905 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 STRBPQ96SI9 672 aaKnown RBP19.32■□□□□ 0.68
VCAN-204ENST00000502527 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
VCAN-204ENST00000502527 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 POLR3EQ9NVU0 708 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 WWC3Q9ULE0 1092 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 LRP5O75197 1615 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 ZMYM6O95789 1325 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 CDKL5O76039 1030 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 STK38Q15208 465 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
VCAN-204ENST00000502527 LINC00301Q8NCQ3 95 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 GOLGA6L19H0YKK7 550 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 SH2B2O14492 632 aaPredicted RBP19.31■□□□□ 0.68
VCAN-204ENST00000502527 MAP3K12Q12852 859 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
VCAN-204ENST00000502527 RAB11FIP4Q86YS3 637 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 DRC7Q8IY82 874 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 TMEM87BQ96K49 555 aa19.31■□□□□ 0.68
VCAN-204ENST00000502527 PARP10Q53GL7 1025 aa19.3■□□□□ 0.68
VCAN-204ENST00000502527 MYSM1Q5VVJ2 828 aa19.3■□□□□ 0.68
VCAN-204ENST00000502527 CPLX2Q6PUV4 134 aaKnown RBP19.3■□□□□ 0.68
VCAN-204ENST00000502527 SYNE3Q6ZMZ3 975 aa19.3■□□□□ 0.68
VCAN-204ENST00000502527 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
VCAN-204ENST00000502527 ANO10Q9NW15 660 aa19.3■□□□□ 0.68
VCAN-204ENST00000502527 PATL2C9JE40 543 aaKnown RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
VCAN-204ENST00000502527 IQCB1Q15051 598 aa19.29■□□□□ 0.68
VCAN-204ENST00000502527 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 C17orf53Q8N3J3 647 aaPredicted RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 PRIMPOLQ96LW4 560 aa19.29■□□□□ 0.68
VCAN-204ENST00000502527 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
VCAN-204ENST00000502527 DDX60Q8IY21 1712 aaKnown RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 DYNC1I1O14576 645 aa19.29■□□□□ 0.68
VCAN-204ENST00000502527 PTGS1P23219 599 aa19.29■□□□□ 0.68
VCAN-204ENST00000502527 CRKLP46109 303 aaKnown RBP19.29■□□□□ 0.68
VCAN-204ENST00000502527 B4E1Z4 1266 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 SPTLC2O15270 562 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 ATP6V1AP38606 617 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 KIF23Q02241 960 aaPredicted RBP19.28■□□□□ 0.68
VCAN-204ENST00000502527 RASGRF1Q13972 1273 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 DDB1Q16531 1140 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 CCDC152Q4G0S7 254 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 SARM1Q6SZW1 724 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 PYCARDQ9ULZ3 195 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 THRAP3Q9Y2W1 955 aaKnown RBP19.28■□□□□ 0.68
VCAN-204ENST00000502527 COL16A1Q07092 1604 aaPredicted RBP19.28■□□□□ 0.68
VCAN-204ENST00000502527 CDC25BP30305 580 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 APOA5Q6Q788 366 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 C11orf57Q6ZUT1 292 aaPredicted RBP19.28■□□□□ 0.68
VCAN-204ENST00000502527 MAGEB6Q8N7X4 407 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 DENND2AQ9ULE3 1009 aa19.28■□□□□ 0.68
VCAN-204ENST00000502527 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
VCAN-204ENST00000502527 SLIT2O94813 1529 aa19.27■□□□□ 0.68
VCAN-204ENST00000502527 CCDC186Q7Z3E2 898 aa19.27■□□□□ 0.68
VCAN-204ENST00000502527 SDF4Q9BRK5 362 aa19.27■□□□□ 0.68
VCAN-204ENST00000502527 NAPBQ9H115 298 aa19.27■□□□□ 0.68
VCAN-204ENST00000502527 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.67
VCAN-204ENST00000502527 ARAP2Q8WZ64 1704 aa19.27■□□□□ 0.67
VCAN-204ENST00000502527 RTL9Q8NET4 1388 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 ZBTB43O43298 467 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 MBD4O95243 580 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 IGHMBP2P38935 993 aaKnown RBP19.26■□□□□ 0.67
VCAN-204ENST00000502527 ANO1Q5XXA6 986 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 SGMS1Q86VZ5 419 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 IFNL3Q8IZI9 196 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 IGDCC4Q8TDY8 1250 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 ALG1Q9BT22 464 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
VCAN-204ENST00000502527 SEC31BQ9NQW1 1179 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 DOT1LQ8TEK3 1739 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 NEDD4P46934 1319 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 A0A0G2JS52 829 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 A0A1B0GVL5 298 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 BECN2A8MW95 431 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 KIF28PB7ZC32 967 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 NFXL1Q6ZNB6 911 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 CEP57L1Q8IYX8 460 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms