RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 LRRC2Q9BYS8 371 aa21.14■□□□□ 0.98
CHRNA4-206ENST00000498043 ANKRD1Q15327 319 aa21.14■□□□□ 0.97
CHRNA4-206ENST00000498043 EPB41L4AQ9HCS5 686 aaPredicted RBP21.14■□□□□ 0.97
CHRNA4-206ENST00000498043 PODXL2Q9NZ53 605 aa21.14■□□□□ 0.97
CHRNA4-206ENST00000498043 POLLQ9UGP5 575 aa21.14■□□□□ 0.97
CHRNA4-206ENST00000498043 ZNF213O14771 459 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 HMGB1P09429 215 aaKnown RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 PRDX5P30044 214 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 ME3Q16798 604 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 NAA16Q6N069 864 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 Q6ZUG5 572 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 C15orf52Q6ZUT6 534 aaKnown RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 CCDC83Q8IWF9 413 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 TBC1D16Q8TBP0 767 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 ZNF384Q8TF68 577 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 ATP6V0A2Q9Y487 856 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 DUOX1Q9NRD9 1551 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 PRKAB2O43741 272 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 SP8Q8IXZ3 490 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 MASTLQ96GX5 879 aa21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 ALDH8A1Q9H2A2 487 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-206ENST00000498043 C6orf229H3BNL8 230 aa21.12■□□□□ 0.97
CHRNA4-206ENST00000498043 MECOMQ03112 1051 aa21.12■□□□□ 0.97
CHRNA4-206ENST00000498043 DHX32Q7L7V1 743 aaKnown RBP21.12■□□□□ 0.97
CHRNA4-206ENST00000498043 SLC4A4Q9Y6R1 1079 aa21.12■□□□□ 0.97
CHRNA4-206ENST00000498043 CHD4Q14839 1912 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 MAGEB6P1A0A0J9YX57 407 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 FGD1P98174 961 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 C2CD5Q86YS7 1000 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 NECAB1Q8N987 351 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 TDRD7Q8NHU6 1098 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 ZNF622Q969S3 477 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 NSUN4Q96CB9 384 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 NBPF3Q9H094 633 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 PATL2C9JE40 543 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 NUCB2P80303 420 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 ST3GAL1Q11201 340 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 IFNL3Q8IZI9 196 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 NAPBQ9H115 298 aa21.11■□□□□ 0.97
CHRNA4-206ENST00000498043 ZMYM6O95789 1325 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 GSG1L2A8MUP6 293 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 GNAT2P19087 354 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 CHST3Q7LGC8 479 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 TBC1D10CQ8IV04 446 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 KIAA1551Q9HCM1 1747 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 TIAM2Q8IVF5 1701 aa21.1■□□□□ 0.97
CHRNA4-206ENST00000498043 BRF1Q92994 677 aa21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 ZBTB22O15209 634 aa21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 DTNBO60941 627 aa21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 TDO2P48775 406 aa21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 DYNLL1P63167 89 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 DZIP1Q86YF9 867 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 RIOK1Q9BRS2 568 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 CD209Q9NNX6 404 aa21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.09■□□□□ 0.97
CHRNA4-206ENST00000498043 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 STK3Q13188 491 aa21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 ALX1Q15699 326 aa21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 RALYLQ86SE5 291 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 WDR66Q8TBY9 1149 aa21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 SDR42E1Q8WUS8 393 aa21.08■□□□□ 0.97
CHRNA4-206ENST00000498043 SALL1Q9NSC2 1324 aa21.08■□□□□ 0.96
CHRNA4-206ENST00000498043 H0YIN7 160 aa21.08■□□□□ 0.96
CHRNA4-206ENST00000498043 CHRNA5P30532 468 aa21.08■□□□□ 0.96
CHRNA4-206ENST00000498043 NACAP1Q9BZK3 213 aa21.08■□□□□ 0.96
CHRNA4-206ENST00000498043 MCM4P33991 863 aa21.07■□□□□ 0.96
CHRNA4-206ENST00000498043 SPTY2D1Q68D10 685 aaPredicted RBP21.07■□□□□ 0.96
CHRNA4-206ENST00000498043 NCOA7Q8NI08 942 aa21.07■□□□□ 0.96
CHRNA4-206ENST00000498043 SMC3Q9UQE7 1217 aa21.07■□□□□ 0.96
CHRNA4-206ENST00000498043 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 RIMBP2O15034 1052 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 IL1R1P14778 569 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 DPP8Q6V1X1 898 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 MB21D2Q8IYB1 491 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 MPNDQ8N594 471 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 ZDHHC9Q9Y397 364 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 LDHBP07195 334 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 FOXD4L5Q5VV16 416 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 FOXD4L4Q8WXT5 416 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 AATFQ9NY61 560 aaKnown RBP eCLIP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 BAZ2AQ9UIF9 1905 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 NEDD4P46934 1319 aa21.06■□□□□ 0.96
CHRNA4-206ENST00000498043 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 GRIK5Q16478 980 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 STYK1Q6J9G0 422 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 GBP4Q96PP9 640 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 TMX4Q9H1E5 349 aaPredicted RBP21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 PRC1O43663 620 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 APOBRQ0VD83 1088 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 TRDNQ13061 729 aa21.05■□□□□ 0.96
CHRNA4-206ENST00000498043 GJB2P29033 226 aa21.04■□□□□ 0.96
CHRNA4-206ENST00000498043 MCM5P33992 734 aa21.04■□□□□ 0.96
CHRNA4-206ENST00000498043 ANTXR2P58335 489 aa21.04■□□□□ 0.96
CHRNA4-206ENST00000498043 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
CHRNA4-206ENST00000498043 NKX2-3Q8TAU0 364 aa21.03■□□□□ 0.96
CHRNA4-206ENST00000498043 GPHNQ9NQX3 736 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms