RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ANKRD34AQ69YU3 496 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 BHLHE41Q9C0J9 482 aaPredicted RBP8.25□□□□□ -1.09
GGPS1-208ENST00000497327 RNF208Q9H0X6 261 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 LATS2Q9NRM7 1088 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 CCDC87Q9NVE4 849 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 CASKIN1Q8WXD9 1431 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 EDN3P14138 238 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
GGPS1-208ENST00000497327 EHHADHQ08426 723 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 C19orf57Q0VDD7 668 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
GGPS1-208ENST00000497327 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
GGPS1-208ENST00000497327 RUSC1Q9BVN2 902 aa8.24□□□□□ -1.09
GGPS1-208ENST00000497327 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 PRR19A6NJB7 356 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 USP5P45974 858 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 KRTAP4-12Q9BQ66 201 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 FAM83CQ9BQN1 747 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 ANO2Q9NQ90 1003 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 MAP3K1Q13233 1512 aa8.23□□□□□ -1.09
GGPS1-208ENST00000497327 COBLO75128 1261 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 DLGAP3O95886 979 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 BMP3P12645 472 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 AAMPQ13685 434 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 IKBKEQ14164 716 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 AMOTL2Q9Y2J4 779 aa8.22□□□□□ -1.09
GGPS1-208ENST00000497327 KIAA0556O60303 1618 aa8.21□□□□□ -1.09
GGPS1-208ENST00000497327 CHD1O14646 1710 aa8.21□□□□□ -1.09
GGPS1-208ENST00000497327 ARL4DP49703 201 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
GGPS1-208ENST00000497327 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 SOX17Q9H6I2 414 aaPredicted RBP8.21□□□□□ -1.1
GGPS1-208ENST00000497327 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 HIF3AQ9Y2N7 669 aa8.21□□□□□ -1.1
GGPS1-208ENST00000497327 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 CLASP1Q7Z460 1538 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 LOC100289279A0A1B0GTE1 492 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
GGPS1-208ENST00000497327 ADAMTS4O75173 837 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 TIAF1O95411 115 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 ABL1P00519 1130 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
GGPS1-208ENST00000497327 SPINK2P20155 84 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 ECM1Q16610 540 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 FDX2Q6P4F2 183 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
GGPS1-208ENST00000497327 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
GGPS1-208ENST00000497327 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
GGPS1-208ENST00000497327 SHROOM2Q13796 1616 aa8.19□□□□□ -1.1
GGPS1-208ENST00000497327 POLR3DP05423 398 aaPredicted RBP8.19□□□□□ -1.1
GGPS1-208ENST00000497327 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
GGPS1-208ENST00000497327 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
GGPS1-208ENST00000497327 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
GGPS1-208ENST00000497327 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
GGPS1-208ENST00000497327 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
GGPS1-208ENST00000497327 MCTP1Q6DN14 999 aa8.18□□□□□ -1.1
GGPS1-208ENST00000497327 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
GGPS1-208ENST00000497327 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
GGPS1-208ENST00000497327 EGFL7Q9UHF1 273 aa8.18□□□□□ -1.1
GGPS1-208ENST00000497327 USP26Q9BXU7 913 aa8.17□□□□□ -1.1
GGPS1-208ENST00000497327 PCGF6Q9BYE7 350 aa8.17□□□□□ -1.1
GGPS1-208ENST00000497327 TIAM1Q13009 1591 aa8.17□□□□□ -1.1
GGPS1-208ENST00000497327 A0A1W2PP55 124 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 ICMTO60725 284 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
GGPS1-208ENST00000497327 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
GGPS1-208ENST00000497327 DTX1Q86Y01 620 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 GALNT12Q8IXK2 581 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 TCF12Q99081 682 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
GGPS1-208ENST00000497327 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
GGPS1-208ENST00000497327 LRRC9Q6ZRR7 1453 aa8.15□□□□□ -1.1
GGPS1-208ENST00000497327 COL17A1Q9UMD9 1497 aaPredicted RBP8.15□□□□□ -1.1
GGPS1-208ENST00000497327 PTPRGP23470 1445 aa8.15□□□□□ -1.1
GGPS1-208ENST00000497327 GAS2O43903 313 aaKnown RBP8.15□□□□□ -1.1
GGPS1-208ENST00000497327 NUTM2GQ5VZR2 741 aa8.15□□□□□ -1.1
GGPS1-208ENST00000497327 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
GGPS1-208ENST00000497327 NUP153P49790 1475 aaKnown RBP8.14□□□□□ -1.11
GGPS1-208ENST00000497327 PLB1Q6P1J6 1458 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 GRIK1P39086 918 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 GRIA4P48058 902 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 SERPINB4P48594 390 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 GP2P55259 537 aaKnown RBP8.14□□□□□ -1.11
GGPS1-208ENST00000497327 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
GGPS1-208ENST00000497327 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
GGPS1-208ENST00000497327 TTBK1Q5TCY1 1321 aaPredicted RBP8.13□□□□□ -1.11
GGPS1-208ENST00000497327 A0A096LPE4 126 aa8.13□□□□□ -1.11
GGPS1-208ENST00000497327 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
GGPS1-208ENST00000497327 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
GGPS1-208ENST00000497327 CTSBP07858 339 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms