RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NIM1KQ8IY84 436 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 C7orf43Q8WVR3 580 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 GJA3Q9Y6H8 435 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 LAMB4A4D0S4 1761 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 FER1L6Q2WGJ9 1857 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 ERBB4Q15303 1308 aa7.52□□□□□ -1.2
CACNA1C-229ENST00000496818 RASSF10A6NK89 507 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 VEGFBP49765 207 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 MAP1SQ66K74 1059 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 PPP1R18Q6NYC8 613 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 SYNE4Q8N205 404 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 NGEFQ8N5V2 710 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 RBM17Q96I25 401 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 PNNQ9H307 717 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 SNED1Q8TER0 1413 aa7.52□□□□□ -1.21
CACNA1C-229ENST00000496818 PPIP5K2O43314 1243 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 SKIP12755 728 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 MYL6BP14649 208 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 GPTP24298 496 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 HLFQ16534 295 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 DEFB115Q30KQ5 88 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 PARP10Q53GL7 1025 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 OLFM4Q6UX06 510 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 ZNF511Q8NB15 262 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 SUPT20HQ8NEM7 779 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 CEP126Q9P2H0 1117 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 GPSM3Q9Y4H4 160 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 UBN2Q6ZU65 1347 aa7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 WDR33Q9C0J8 1336 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-229ENST00000496818 SCN4AP35499 1836 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 VIRMAQ69YN4 1812 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 GGCXP38435 758 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 SCNN1DP51172 638 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 LBX1P52954 281 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 MMRN1Q13201 1228 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 GRM1Q13255 1194 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 USP50Q70EL3 339 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 RRP7AQ9Y3A4 280 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 ADAMTSL1Q8N6G6 1762 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 SLX4Q8IY92 1834 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 CDHR2Q9BYE9 1310 aa7.5□□□□□ -1.21
CACNA1C-229ENST00000496818 THSD7BQ9C0I4 1608 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 NTSR2O95665 410 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 HSPA8P11142 646 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 HOXA10P31260 410 aaPredicted RBP7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 SH3BP2P78314 561 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 LMOD3Q0VAK6 560 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 NFE2L2Q16236 605 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 SLFNL1Q499Z3 407 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 HSP90AB3PQ58FF7 597 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 BPHLQ86WA6 291 aaPredicted RBP7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 FAM174AQ8TBP5 190 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 CAPNS2Q96L46 248 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 CRAMP1Q96RY5 1269 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 VPS33BQ9H267 617 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 ADARB2Q9NS39 739 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 MIS18AQ9NYP9 233 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 TSPYL4Q9UJ04 414 aa7.49□□□□□ -1.21
CACNA1C-229ENST00000496818 TCERG1O14776 1098 aaKnown RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 CA12O43570 354 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 ATP9BO43861 1147 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 AOC3Q16853 763 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 SUSD4Q5VX71 490 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 DPP8Q6V1X1 898 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 TTLL7Q6ZT98 887 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 SH3RF1Q7Z6J0 888 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 ANKLE1Q8NAG6 615 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 RETREG2Q8NC44 543 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 PBXIP1Q96AQ6 731 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 ABHD8Q96I13 439 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 UTP14AQ9BVJ6 771 aaKnown RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 MAFBQ9Y5Q3 323 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 TLL2Q9Y6L7 1015 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 ABCC4O15439 1325 aa7.48□□□□□ -1.21
CACNA1C-229ENST00000496818 CACNA1SQ13698 1873 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 EPS15P42566 896 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 TRIM32Q13049 653 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 CYP4F22Q6NT55 531 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 RNF135Q8IUD6 432 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 ZNF34Q8IZ26 560 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 THUMPD2Q9BTF0 503 aaKnown RBP7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 BCL2L13Q9BXK5 485 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 GPRC5DQ9NZD1 345 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms