RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GRIA4P48058 902 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 PDE3BQ13370 1112 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 SPRED3Q2MJR0 410 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 HP1BP3Q5SSJ5 553 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-218ENST00000493430 FBXL6Q8N531 539 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 DDX54Q8TDD1 881 aaKnown RBP6.39□□□□□ -1.39
PTCD3-218ENST00000493430 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 LEMD3Q9Y2U8 911 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 PAX4O43316 350 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 ADAMTS4O75173 837 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 MAOBP27338 520 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 SERPINB4P48594 390 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 ECM1Q16610 540 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTCD3-218ENST00000493430 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 C2CD4AQ8NCU7 369 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-218ENST00000493430 OSBPL1AQ9BXW6 950 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 NRSN2Q9GZP1 204 aa6.38□□□□□ -1.39
PTCD3-218ENST00000493430 CPNE3O75131 537 aaKnown RBP6.37□□□□□ -1.39
PTCD3-218ENST00000493430 F13BP05160 661 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 HOXA10P31260 410 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-218ENST00000493430 ARHGAP4P98171 946 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 POU4F3Q15319 338 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 USPL1Q5W0Q7 1092 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 CITED4Q96RK1 184 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 EHD4Q9H223 541 aa6.37□□□□□ -1.39
PTCD3-218ENST00000493430 EZH1Q92800 747 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-218ENST00000493430 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-218ENST00000493430 RAD18Q9NS91 495 aa6.36□□□□□ -1.39
PTCD3-218ENST00000493430 B3GALT4O96024 378 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 ADH5P11766 374 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 FOSL1P15407 271 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 TAL1P17542 331 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-218ENST00000493430 ORC1Q13415 861 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 TBC1D32Q96NH3 1257 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 FAM129BQ96TA1 746 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 CORO1BQ9BR76 489 aa6.35□□□□□ -1.39
PTCD3-218ENST00000493430 ITPKAP23677 461 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 PDE4CQ08493 712 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 MAP7Q14244 749 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 DYMQ7RTS9 669 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 ZAR1Q86SH2 424 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 DNAJC25Q9H1X3 360 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 ZNF576Q9H609 170 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 PRKAG2Q9UGJ0 569 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 ANGEL1Q9UNK9 670 aaKnown RBP6.34□□□□□ -1.39
PTCD3-218ENST00000493430 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 CCDC180Q9P1Z9 1646 aa6.34□□□□□ -1.39
PTCD3-218ENST00000493430 CTSBP07858 339 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 NFICP08651 508 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 ADMP35318 185 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 TXKP42681 527 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
PTCD3-218ENST00000493430 DUSP27Q5VZP5 1158 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 TXNDC2Q86VQ3 553 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 SHISA5Q8N114 240 aa6.33□□□□□ -1.4
PTCD3-218ENST00000493430 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
PTCD3-218ENST00000493430 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-218ENST00000493430 EIF1AYO14602 144 aaKnown RBP6.32□□□□□ -1.4
PTCD3-218ENST00000493430 CYP26A1O43174 497 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 RAB6AP20340 208 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 AP3B2Q13367 1082 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 NIF3L1Q9GZT8 377 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 GOLGA2P5Q9HBQ8 144 aa6.32□□□□□ -1.4
PTCD3-218ENST00000493430 GADD45BO75293 160 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-218ENST00000493430 ECEL1O95672 775 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 ASPAP45381 313 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 PDE3AQ14432 1141 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-218ENST00000493430 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
PTCD3-218ENST00000493430 CCER1Q8TC90 406 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-218ENST00000493430 SEMA6CQ9H3T2 930 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 ACSS3Q9H6R3 686 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 CCDC39Q9UFE4 941 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 AP4E1Q9UPM8 1137 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 TRAK1Q9UPV9 953 aa6.31□□□□□ -1.4
PTCD3-218ENST00000493430 SYNGAP1Q96PV0 1343 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 FAM170BA6NMN3 283 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 GPR182O15218 404 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 AOC2O75106 756 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 PRNPP04156 253 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 KRTAP1-3Q8IUG1 177 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 GATA6Q92908 595 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 DMRTB1Q96MA1 342 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 FMNL2Q96PY5 1086 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 ARID3AQ99856 593 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 GSX1Q9H4S2 264 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-218ENST00000493430 ABCB6Q9NP58 842 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 BSDC1Q9NW68 430 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms