RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 ANKRD2Q9GZV1 360 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 FOXP2O15409 715 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 CHAF1AQ13111 956 aaPredicted RBP11.97□□□□□ -0.49
HDAC9-225ENST00000490851 RAB3GAP1Q15042 981 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
HDAC9-225ENST00000490851 TXNRD3Q86VQ6 643 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 MIGA1Q8NAN2 632 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 AIDAQ96BJ3 306 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 RAI14Q9P0K7 980 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 COL1A1P02452 1464 aaPredicted RBP11.97□□□□□ -0.49
HDAC9-225ENST00000490851 CUL4AQ13619 759 aa11.96□□□□□ -0.49
HDAC9-225ENST00000490851 KRT32Q14532 448 aa11.96□□□□□ -0.49
HDAC9-225ENST00000490851 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-225ENST00000490851 NECAB1Q8N987 351 aa11.96□□□□□ -0.49
HDAC9-225ENST00000490851 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.5
HDAC9-225ENST00000490851 TCRBV5S4A2TA0A5A2 114 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 MBD4O95243 580 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 FGAP02671 866 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 PSEN1P49768 467 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 STK3Q13188 491 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 UBE3CQ15386 1083 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 CHST3Q7LGC8 479 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 FBXO41Q8TF61 875 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 ARMT1Q9H993 441 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.5
HDAC9-225ENST00000490851 E7EWF7 191 aa11.95□□□□□ -0.5
HDAC9-225ENST00000490851 MMP10P09238 476 aa11.95□□□□□ -0.5
HDAC9-225ENST00000490851 HIBADHP31937 336 aaKnown RBP11.95□□□□□ -0.5
HDAC9-225ENST00000490851 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
HDAC9-225ENST00000490851 MCM4P33991 863 aa11.95□□□□□ -0.5
HDAC9-225ENST00000490851 TSGA10IPQ3SY00 556 aa11.95□□□□□ -0.5
HDAC9-225ENST00000490851 UTP14CQ5TAP6 766 aaKnown RBP11.95□□□□□ -0.5
HDAC9-225ENST00000490851 NLGN1Q8N2Q7 840 aa11.95□□□□□ -0.5
HDAC9-225ENST00000490851 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
HDAC9-225ENST00000490851 CYP7A1P22680 504 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 GPSM2P81274 684 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
HDAC9-225ENST00000490851 ME3Q16798 604 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
HDAC9-225ENST00000490851 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 Q6ZUG5 572 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 FBXO33Q7Z6M2 555 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
HDAC9-225ENST00000490851 XDHP47989 1333 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 PRKAB2O43741 272 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 UFL1O94874 794 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 NUCB2P80303 420 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 INTS4Q96HW7 963 aaKnown RBP11.93□□□□□ -0.5
HDAC9-225ENST00000490851 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
HDAC9-225ENST00000490851 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 PARP3Q9Y6F1 533 aa11.93□□□□□ -0.5
HDAC9-225ENST00000490851 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
HDAC9-225ENST00000490851 FOXD4L6Q3SYB3 417 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-225ENST00000490851 FOXD4L3Q6VB84 417 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-225ENST00000490851 STK11IPQ8N1F8 1099 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 BRF1Q92994 677 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 SMC3Q9UQE7 1217 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 DOCK2Q92608 1830 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 ZNF213O14771 459 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 CEP120Q8N960 986 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 FLAD1Q8NFF5 587 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 TRIM44Q96DX7 344 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-225ENST00000490851 GBP4Q96PP9 640 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
HDAC9-225ENST00000490851 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
HDAC9-225ENST00000490851 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
HDAC9-225ENST00000490851 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
HDAC9-225ENST00000490851 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
HDAC9-225ENST00000490851 EPB41L4AQ9HCS5 686 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-225ENST00000490851 MYH13Q9UKX3 1938 aa11.91□□□□□ -0.5
HDAC9-225ENST00000490851 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
HDAC9-225ENST00000490851 PRDX5P30044 214 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 TDO2P48775 406 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 DYNLL1P63167 89 aaKnown RBP11.9□□□□□ -0.5
HDAC9-225ENST00000490851 APOBRQ0VD83 1088 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
HDAC9-225ENST00000490851 TBC1D10CQ8IV04 446 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 NAPBQ9H115 298 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 INCENPQ9NQS7 918 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
HDAC9-225ENST00000490851 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 GGA1Q9UJY5 639 aa11.9□□□□□ -0.5
HDAC9-225ENST00000490851 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms