RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	HMGN5	P82970	282 aa	Known RBP	12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	TRDN	Q13061	729 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	LARP1B	Q659C4	914 aa	Known RBP	12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	STOX1	Q6ZVD7	989 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	TMEM87A	Q8NBN3	555 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	RGS22	Q8NE09	1264 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	NCOA7	Q8NI08	942 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	GTF3C6	Q969F1	213 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	AIDA	Q96BJ3	306 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	STRBP	Q96SI9	672 aa	Known RBP	12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	ZNF532	Q9HCE3	1301 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	CARMIL3	Q8ND23	1372 aa		12.81	□□□□□ -0.36
ITSN1-231	ENST00000489261	AKAP11	Q9UKA4	1901 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	FSD2	A1L4K1	749 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	MCM5	P33992	734 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	MRE11	P49959	708 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	BCAM	P50895	628 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	RASGRF1	Q13972	1273 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	FBXO33	Q7Z6M2	555 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	TAF6L	Q9Y6J9	622 aa		12.8	□□□□□ -0.36
ITSN1-231	ENST00000489261	ANKRD31	Q8N7Z5	1873 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	DHX16	O60231	1041 aa	Known RBP	12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	TM4SF1	P30408	202 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	DDR1	Q08345	913 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	SLFNL1	Q499Z3	407 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	PI16	Q6UXB8	463 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	RALYL	Q86SE5	291 aa	Known RBP	12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	VPS37D	Q86XT2	251 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	NECAB1	Q8N987	351 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	BRF1	Q92994	677 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	SYAP1	Q96A49	352 aa	Predicted RBP	12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	LARP6	Q9BRS8	491 aa	Known RBP	12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	MTA3	Q9BTC8	594 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	NACAP1	Q9BZK3	213 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	MTMR6	Q9Y217	621 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	PARP3	Q9Y6F1	533 aa		12.79	□□□□□ -0.36
ITSN1-231	ENST00000489261	POLRMT	O00411	1230 aa	Known RBP	12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	NPHP1	O15259	732 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	GRIN3B	O60391	1043 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	TGFB2	P61812	414 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	ST3GAL1	Q11201	340 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	MAGEB6	Q8N7X4	407 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	SMARCC2	Q8TAQ2	1214 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	CELF1	Q92879	486 aa	Known RBP	12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	LRP2BP	Q9P2M1	347 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	LEMD3	Q9Y2U8	911 aa		12.78	□□□□□ -0.36
ITSN1-231	ENST00000489261	FOXP2	O15409	715 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	APP	P05067	770 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	ZNF445	P59923	1031 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	GRAP	Q13588	217 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	NFIX	Q14938	502 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	TTLL5	Q6EMB2	1281 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	C3orf67	Q6ZVT6	689 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	CNBD1	Q8NA66	436 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	GRAPL	Q8TC17	118 aa	Predicted RBP	12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	TMEM87B	Q96K49	555 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	FAM84B	Q96KN1	310 aa	Predicted RBP	12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	TCEANC2	Q96MN5	208 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	GZF1	Q9H116	711 aa	Predicted RBP	12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	CNNM2	Q9H8M5	875 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	WWC3	Q9ULE0	1092 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	MYH7	P12883	1935 aa		12.77	□□□□□ -0.37
ITSN1-231	ENST00000489261	LETM1	O95202	739 aa	Predicted RBP	12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	ST5	P78524	1137 aa		12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	C15orf52	Q6ZUT6	534 aa	Known RBP	12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	IFNL3	Q8IZI9	196 aa		12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	FAM184A	Q8NB25	1140 aa		12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	KRT23	Q9C075	422 aa		12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	NAPB	Q9H115	298 aa		12.76	□□□□□ -0.37
ITSN1-231	ENST00000489261	PRC1	O43663	620 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	PDIA3	P30101	505 aa	Known RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	HIBADH	P31937	336 aa	Known RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	NT5C2	P49902	561 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	UBE2H	P62256	183 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	SCRN1	Q12765	414 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	ATL3	Q6DD88	541 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	NAA16	Q6N069	864 aa	Predicted RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	GIMAP6	Q6P9H5	292 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	TMC4	Q7Z404	712 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	USP48	Q86UV5	1035 aa		12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	RBM17	Q96I25	401 aa	Known RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	RNF41	Q9H4P4	317 aa	Predicted RBP	12.75	□□□□□ -0.37
ITSN1-231	ENST00000489261	COL11A2	P13942	1736 aa	Predicted RBP	12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	VPS37C	A5D8V6	355 aa	Predicted RBP	12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	SNAP23	O00161	211 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	BBOX1	O75936	387 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	MBD4	O95243	580 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	PC	P11498	1178 aa	Known RBP	12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	CYP7A1	P22680	504 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	GYG1	P46976	350 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	KRT85	P78386	507 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	APOBR	Q0VD83	1088 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	STK3	Q13188	491 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	TMTC2	Q8N394	836 aa		12.74	□□□□□ -0.37
ITSN1-231	ENST00000489261	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms