RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 TIMM10P62072 90 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 FANCCQ00597 558 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
NEB-215ENST00000489048 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
NEB-215ENST00000489048 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEB-215ENST00000489048 CPDO75976 1380 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
NEB-215ENST00000489048 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.37
NEB-215ENST00000489048 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
NEB-215ENST00000489048 FCHSD1Q86WN1 690 aa12.71□□□□□ -0.37
NEB-215ENST00000489048 CWC25Q9NXE8 425 aaPredicted RBP12.71□□□□□ -0.37
NEB-215ENST00000489048 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
NEB-215ENST00000489048 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.37
NEB-215ENST00000489048 A0A1B0GUL7 405 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 KIF28PB7ZC32 967 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 IGSF3O75054 1194 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 PPP6R2O75170 966 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.38
NEB-215ENST00000489048 SLC39A14Q15043 492 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 SYT10Q6XYQ8 523 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 FBXO3Q9UK99 471 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.38
NEB-215ENST00000489048 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 CBFA2T2O43439 604 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 PRC1O43663 620 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 ANTXR2P58335 489 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
NEB-215ENST00000489048 OTUD7BQ6GQQ9 843 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 SRRTQ9BXP5 876 aaKnown RBP12.7□□□□□ -0.38
NEB-215ENST00000489048 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
NEB-215ENST00000489048 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 CYP27B1O15528 508 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
NEB-215ENST00000489048 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
NEB-215ENST00000489048 ELOA2Q8IYF1 753 aaPredicted RBP12.69□□□□□ -0.38
NEB-215ENST00000489048 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 NLRP2Q9NX02 1062 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 FHOD1Q9Y613 1164 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
NEB-215ENST00000489048 ERCC6LQ2NKX8 1250 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
NEB-215ENST00000489048 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
NEB-215ENST00000489048 FGAP02671 866 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 CLCN6P51797 869 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 APPBP2Q92624 585 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
NEB-215ENST00000489048 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 ZRANB2O95218 330 aaKnown RBP eCLIP12.68□□□□□ -0.38
NEB-215ENST00000489048 MYL5Q02045 173 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 PTPAQ15257 358 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 LRRN4CLQ8ND94 238 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 BIN1O00499 593 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 SYKP43405 635 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 REXO1L1PQ8IX06 675 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
NEB-215ENST00000489048 ATRNO75882 1429 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 CPLX1O14810 134 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 ATP8B1O43520 1251 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 CABP4P57796 275 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 AKAP2Q9Y2D5 859 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 TPM1P09493 284 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 ATP1A3P13637 1013 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
NEB-215ENST00000489048 UBASH3AP57075 661 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
NEB-215ENST00000489048 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 MAP3K14Q99558 947 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.67□□□□□ -0.38
NEB-215ENST00000489048 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
NEB-215ENST00000489048 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 MYH7P12883 1935 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 TADA3O75528 432 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
NEB-215ENST00000489048 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
NEB-215ENST00000489048 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
NEB-215ENST00000489048 EFCAB8A8MWE9 144 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms