RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 NBPF5PQ86XG9 351 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 ZBTB22O15209 634 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 H3BQV1 296 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 MBD4O95243 580 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 APPP05067 770 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 TBC1D10CQ8IV04 446 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 PPP1R9BQ96SB3 815 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 TIAM2Q8IVF5 1701 aa18.81■□□□□ 0.6
RAPGEF3-211ENST00000488250 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 CCDC173Q0VFZ6 552 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 FAM182BQ5T319 152 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 IFNL3Q8IZI9 196 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 SEMA3EO15041 775 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 CAVIN4Q5BKX8 364 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 NCOA5Q9HCD5 579 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 GPHNQ9NQX3 736 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 HPS5Q9UPZ3 1129 aa18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 PDS5AQ29RF7 1337 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-211ENST00000488250 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 ANP32BQ92688 251 aaKnown RBP18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 TSPY26PQ9H489 355 aa18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 LRP2BPQ9P2M1 347 aa18.79■□□□□ 0.6
RAPGEF3-211ENST00000488250 KLF18A0A0U1RQI7 1052 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 ADRA2BP18089 450 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 NAPBQ9H115 298 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 DENND2AQ9ULE3 1009 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 ANGEL1Q9UNK9 670 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 TAF1P21675 1872 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 COL1A1P02452 1464 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 GYG1P46976 350 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 ATL3Q6DD88 541 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 FAM173BQ6P4H8 233 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 FBXO33Q7Z6M2 555 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 LEO1Q8WVC0 666 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 NACAP1Q9BZK3 213 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 CARMIL3Q8ND23 1372 aa18.78■□□□□ 0.6
RAPGEF3-211ENST00000488250 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
RAPGEF3-211ENST00000488250 SH2B2O14492 632 aaPredicted RBP18.77■□□□□ 0.6
RAPGEF3-211ENST00000488250 CFAP45Q9UL16 551 aa18.77■□□□□ 0.6
RAPGEF3-211ENST00000488250 NAP1L2Q9ULW6 460 aaPredicted RBP18.77■□□□□ 0.6
RAPGEF3-211ENST00000488250 FDPSP14324 419 aaKnown RBP18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 TM4SF1P30408 202 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 RFC4P35249 363 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 LCORLQ8N3X6 602 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 SPATA32Q96LK8 384 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 CNNM2Q9H8M5 875 aa18.76■□□□□ 0.59
RAPGEF3-211ENST00000488250 ADD1P35611 737 aaKnown RBP18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 TMED8Q6PL24 325 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 MTA3Q9BTC8 594 aa18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 SLC4A4Q9Y6R1 1079 aa18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 NEDD4P46934 1319 aa18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
RAPGEF3-211ENST00000488250 CYP7A1P22680 504 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 AKNAD1Q5T1N1 836 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 IGDCC4Q8TDY8 1250 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 STAG1Q8WVM7 1258 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 KRT23Q9C075 422 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 B4E1Z4 1266 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 LIFRP42702 1097 aa18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
RAPGEF3-211ENST00000488250 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 CHD4Q14839 1912 aa18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 PDLIM2Q96JY6 352 aa18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 IQSEC3Q9UPP2 1182 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF3-211ENST00000488250 PRKAB2O43741 272 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 TDO2P48775 406 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 NFIXQ14938 502 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms