RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NISCHQ9Y2I1 1504 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 LINC01387J3KSC0 135 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 OIP5O43482 229 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 LILRB5O75023 590 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 RPS26P62854 115 aaKnown RBP7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 KANK3Q6NY19 840 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 SULF2Q8IWU5 870 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 KCNQ5Q9NR82 932 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 PPME1Q9Y570 386 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 PCDHB5Q9Y5E4 795 aa7.75□□□□□ -1.17
PRPF38A-203ENST00000487160 LOC105371045A0A1W2PR82 267 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 SHISA8B8ZZ34 492 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 GREM1O60565 184 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 BCRP11274 1271 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 ARNTP27540 789 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 SNAP47Q5SQN1 464 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 LYPD4Q6UWN0 246 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 GOLM1Q8NBJ4 401 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 GRIN3AQ8TCU5 1115 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 SUPT16HQ9Y5B9 1047 aaKnown RBP7.74□□□□□ -1.17
PRPF38A-203ENST00000487160 SLURP2P0DP57 97 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 ATP2B1P20020 1258 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 LMNB1P20700 586 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 GMPRP36959 345 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 GSTM4Q03013 218 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 MSL1Q68DK7 614 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 WFDC8Q8IUA0 241 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 DDX54Q8TDD1 881 aaKnown RBP7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 RASGRP4Q8TDF6 673 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 UBXN4Q92575 508 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 NT5C1AQ9BXI3 368 aa7.73□□□□□ -1.17
PRPF38A-203ENST00000487160 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 AMPD1P23109 780 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 LRRC14Q15048 493 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 FAM117BQ6P1L5 589 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 BNC2Q6ZN30 1099 aaPredicted RBP7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 TRIM42Q8IWZ5 723 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 EMILIN2Q9BXX0 1053 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 SOX17Q9H6I2 414 aaPredicted RBP7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 UBP1Q9NZI7 540 aa7.72□□□□□ -1.17
PRPF38A-203ENST00000487160 FSCN2O14926 492 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 F13A1P00488 732 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 GTF2F1P35269 517 aaKnown RBP eCLIP7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 ARL4DP49703 201 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 PIP4K2BP78356 416 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 C19orf57Q0VDD7 668 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 SEPT6Q14141 434 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 WHAMMQ8TF30 809 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.71□□□□□ -1.185e-8■■■□□ 19.2
PRPF38A-203ENST00000487160 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 GINM1Q9NU53 330 aa7.71□□□□□ -1.18
PRPF38A-203ENST00000487160 CRKP46108 304 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 NASPP49321 788 aaPredicted RBP7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 ZNF252P-AS1Q0IIN9 211 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 AP3B2Q13367 1082 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 COL9A3Q14050 684 aaPredicted RBP7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 CCDC84Q86UT8 332 aaPredicted RBP7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 DMRTC2Q8IXT2 367 aaPredicted RBP7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 FBXO27Q8NI29 283 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 WNT8BQ93098 351 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 KLHDC7BQ96G42 594 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 SPATA32Q96LK8 384 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 PRDM6Q9NQX0 595 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 LRRC4BQ9NT99 713 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
PRPF38A-203ENST00000487160 TLR3O15455 904 aaKnown RBP7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 ECEL1O95672 775 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 GSTP1P09211 210 aaKnown RBP7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 FGRP09769 529 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 PTPN11Q06124 597 aaPredicted RBP7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 KCNB2Q92953 911 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 NKD1Q969G9 470 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 SEC16BQ96JE7 1060 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 ZC3H12CQ9C0D7 883 aaKnown RBP7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 OSGEPQ9NPF4 335 aa7.69□□□□□ -1.18
PRPF38A-203ENST00000487160 FAM221AA4D161 298 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 WFS1O76024 890 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 CYP11A1P05108 521 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 NID1P14543 1247 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 SEZ6Q53EL9 994 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 ILDR2Q71H61 639 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 GALNT11Q8NCW6 608 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 GAL3ST3Q96A11 431 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms