RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GUCY1B3Q02153 619 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 ANO6Q4KMQ2 910 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 SUSD4Q5VX71 490 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 SASS6Q6UVJ0 657 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 FTOQ9C0B1 505 aaKnown RBP eCLIP21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 PDE6AP16499 860 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 RREB1Q92766 1687 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 TCRBV5S4A2TA0A5A2 114 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 SLC5A1P13866 664 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 TRDNQ13061 729 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 CCAR1Q8IX12 1150 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 CBX8Q9HC52 389 aa21.04■□□□□ 0.96
PDLIM7-207ENST00000486828 MYO5AQ9Y4I1 1855 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-207ENST00000486828 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
PDLIM7-207ENST00000486828 MPNDQ8N594 471 aa21.03■□□□□ 0.96
PDLIM7-207ENST00000486828 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
PDLIM7-207ENST00000486828 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 TBC1D10CQ8IV04 446 aa21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 ZNF830Q96NB3 372 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 R3HCC1Q9Y3T6 440 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-207ENST00000486828 CTAGE5O15320 804 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 TPM3P06753 285 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 SEPT12Q8IYM1 358 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 PIBF1Q8WXW3 757 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 C8orf76Q96K31 380 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 GOLPH3LQ9H4A5 285 aa21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 TTC12Q9H892 705 aaPredicted RBP21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 ORC3Q9UBD5 711 aaPredicted RBP21.02■□□□□ 0.95
PDLIM7-207ENST00000486828 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 CPLX1O14810 134 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 CAVIN2O95810 425 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 APPP05067 770 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 ATP6V1AP38606 617 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 PARP10Q53GL7 1025 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 CCDC73Q6ZRK6 1079 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 SPATA5Q8NB90 893 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
PDLIM7-207ENST00000486828 DOCK2Q92608 1830 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 CAMTA2O94983 1202 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 ALX1Q15699 326 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 RGS22Q8NE09 1264 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 FBXO18Q8NFZ0 1043 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 TDRD7Q8NHU6 1098 aaKnown RBP21■□□□□ 0.95
PDLIM7-207ENST00000486828 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
PDLIM7-207ENST00000486828 MPHOSPH8Q99549 860 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 ANGEL1Q9UNK9 670 aaKnown RBP21■□□□□ 0.95
PDLIM7-207ENST00000486828 ZMYM6O95789 1325 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 SNW1Q13573 536 aaKnown RBP21■□□□□ 0.95
PDLIM7-207ENST00000486828 CYB5R4Q7L1T6 521 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 AIDAQ96BJ3 306 aa21■□□□□ 0.95
PDLIM7-207ENST00000486828 LOC102724428A0A0B4J2F2 783 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 SH2B2O14492 632 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 SIK1P57059 783 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 FAM160A1Q05DH4 1040 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 ENGASEQ8NFI3 743 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
PDLIM7-207ENST00000486828 ME1P48163 572 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 ZNF165P49910 485 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 MAP3K12Q12852 859 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 RASGRF1Q13972 1273 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 CCDC152Q4G0S7 254 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 OTUD7BQ6GQQ9 843 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 BRAPQ7Z569 592 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 RAB11FIP4Q86YS3 637 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 ACSBG1Q96GR2 724 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 DNAJC25Q9H1X3 360 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 SEC31BQ9NQW1 1179 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 LAMB2P55268 1798 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
PDLIM7-207ENST00000486828 PATL2C9JE40 543 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 KINO60870 393 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 ITPK1Q13572 414 aa20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 FSIP1Q8NA03 581 aa20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 TMEM87BQ96K49 555 aa20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 PCDHA7Q9UN72 937 aa20.97■□□□□ 0.95
PDLIM7-207ENST00000486828 NTSR2O95665 410 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 NOLC1Q14978 699 aaKnown RBP eCLIP20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 ADALQ6DHV7 355 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 MAGEB6Q8N7X4 407 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 LINC00301Q8NCQ3 95 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 NKX2-3Q8TAU0 364 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 POLR3EQ9NVU0 708 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 EP400Q96L91 3159 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 A0A1W2PQ27 194 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 A0A1W2PQ64 194 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 A0A1W2PQD8 194 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 B4E1Z4 1266 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 YEATS4O95619 227 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 IGHMBP2P38935 993 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 METAP2P50579 478 aaKnown RBP eCLIP20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 SPC24Q8NBT2 197 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms