RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 NOD1Q9Y239 953 aa6.89□□□□□ -1.31
GTF2B-206ENST00000486078 EDC4Q6P2E9 1401 aaKnown RBP6.88□□□□□ -1.31
GTF2B-206ENST00000486078 CNTNAP4Q9C0A0 1308 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
GTF2B-206ENST00000486078 TM4SF1P30408 202 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 SEC13P55735 322 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 ECM1Q16610 540 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 MSS51Q4VC12 460 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 EGFLAMQ63HQ2 1017 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 MAP1SQ66K74 1059 aaPredicted RBP6.88□□□□□ -1.31
GTF2B-206ENST00000486078 GCC1Q96CN9 775 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 COG3Q96JB2 828 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 SLC4A9Q96Q91 983 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 PRKD2Q9BZL6 878 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 SLC12A5Q9H2X9 1139 aa6.88□□□□□ -1.31
GTF2B-206ENST00000486078 IQSEC3Q9UPP2 1182 aaPredicted RBP6.88□□□□□ -1.31
GTF2B-206ENST00000486078 DICER1Q9UPY3 1922 aaKnown RBP6.88□□□□□ -1.31
GTF2B-206ENST00000486078 SMG6Q86US8 1419 aaKnown RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 USP42Q9H9J4 1324 aaKnown RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 H0YIN7 160 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 AOC2O75106 756 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 CLSTN1O94985 981 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 RRS1Q15050 365 aaKnown RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 SIX5Q8N196 739 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 SYMPKQ92797 1274 aaKnown RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 SPG7Q9UQ90 795 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 DNMT3AQ9Y6K1 912 aaPredicted RBP6.87□□□□□ -1.31
GTF2B-206ENST00000486078 CASP8AP2Q9UKL3 1982 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 PDE4DIPQ5VU43 2346 aa6.87□□□□□ -1.31
GTF2B-206ENST00000486078 SCN4AP35499 1836 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 PPEF1O14829 653 aaPredicted RBP6.86□□□□□ -1.31
GTF2B-206ENST00000486078 CA12O43570 354 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 EPHX2P34913 555 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 MAP2K2P36507 400 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 PTPROQ16827 1216 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 ZNF622Q969S3 477 aaKnown RBP eCLIP6.86□□□□□ -1.31
GTF2B-206ENST00000486078 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 ZSWIM4Q9H7M6 989 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 DDX21Q9NR30 783 aaKnown RBP eCLIP6.86□□□□□ -1.31
GTF2B-206ENST00000486078 TERF2IPQ9NYB0 399 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 HACL1Q9UJ83 578 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 LTBP1Q14766 1721 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 THSD7BQ9C0I4 1608 aa6.86□□□□□ -1.31
GTF2B-206ENST00000486078 DLEC1Q9Y238 1755 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 RTL1A6NKG5 1358 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 KDRP35968 1356 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 COL5A3P25940 1745 aaPredicted RBP6.85□□□□□ -1.31
GTF2B-206ENST00000486078 SORBS3O60504 671 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
GTF2B-206ENST00000486078 ZNF76P36508 570 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 SLC19A1P41440 591 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 ANAPC15P60006 121 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 FANCCQ00597 558 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 HABP4Q5JVS0 413 aaKnown RBP6.85□□□□□ -1.31
GTF2B-206ENST00000486078 CCDC181Q5TID7 509 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 USPL1Q5W0Q7 1092 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 PNMA8AQ86V59 439 aaPredicted RBP6.85□□□□□ -1.31
GTF2B-206ENST00000486078 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 GMLQ99445 158 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 TAOK3Q9H2K8 898 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 SEPT3Q9UH03 358 aa6.85□□□□□ -1.31
GTF2B-206ENST00000486078 RAB3GAP2Q9H2M9 1393 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 LTBP3Q9NS15 1303 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 DLL1O00548 723 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 NDUFB5O43674 189 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 PRPF40AO75400 957 aaKnown RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 FAM13AO94988 1023 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 SERPINB2P05120 415 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 LDHBP07195 334 aaKnown RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 DNAJA1P31689 397 aaKnown RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 CRKLP46109 303 aaKnown RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 MMP16P51512 607 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 FMR1Q06787 632 aaKnown RBP eCLIP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 RBL2Q08999 1139 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 KCNB2Q92953 911 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 GPATCH3Q96I76 525 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 IRX2Q9BZI1 471 aaPredicted RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 MYH16Q9H6N6 1097 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 VTI1BQ9UEU0 232 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 RIPOR2Q9Y4F9 1068 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
GTF2B-206ENST00000486078 AFDNP55196 1824 aaKnown RBP6.84□□□□□ -1.31
GTF2B-206ENST00000486078 MYH14Q7Z406 1995 aaKnown RBP6.84□□□□□ -1.32
GTF2B-206ENST00000486078 ZNF831Q5JPB2 1677 aa6.84□□□□□ -1.32
GTF2B-206ENST00000486078 A0A1W2PP64 1363 aa6.83□□□□□ -1.32
GTF2B-206ENST00000486078 FER1L6Q2WGJ9 1857 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms