RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 USP11P51784 963 aa6.69□□□□□ -1.34
VPS50-217ENST00000485140 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
VPS50-217ENST00000485140 HHIPQ96QV1 700 aa6.69□□□□□ -1.34
VPS50-217ENST00000485140 CORO1BQ9BR76 489 aa6.69□□□□□ -1.34
VPS50-217ENST00000485140 NLRP2Q9NX02 1062 aa6.69□□□□□ -1.34
VPS50-217ENST00000485140 SOWAHDA6NJG2 315 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 KIAA1324LA8MWY0 1029 aaPredicted RBP6.68□□□□□ -1.34
VPS50-217ENST00000485140 MAP4P27816 1152 aaKnown RBP6.68□□□□□ -1.34
VPS50-217ENST00000485140 CD97P48960 835 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 CYP27A1Q02318 531 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 MAP7Q14244 749 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 TRIM42Q8IWZ5 723 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 TCF12Q99081 682 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 ATG3Q9NT62 314 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 DCTN4Q9UJW0 460 aa6.68□□□□□ -1.34
VPS50-217ENST00000485140 EIF1AYO14602 144 aaKnown RBP6.67□□□□□ -1.34
VPS50-217ENST00000485140 GADD45BO75293 160 aaPredicted RBP6.67□□□□□ -1.34
VPS50-217ENST00000485140 TRPA1O75762 1119 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 PPP2R3AQ06190 1150 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 POU4F3Q15319 338 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 ECM1Q16610 540 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 ADAMTSL4Q6UY14 1074 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
VPS50-217ENST00000485140 CSRNP1Q96S65 589 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 LATS2Q9NRM7 1088 aa6.67□□□□□ -1.34
VPS50-217ENST00000485140 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.66□□□□□ -1.34
VPS50-217ENST00000485140 FAM95CA0A1B0GW59 222 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 RXRBP28702 533 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 FGD1P98174 961 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 SOX4Q06945 474 aaPredicted RBP6.66□□□□□ -1.34
VPS50-217ENST00000485140 KCNA1Q09470 495 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 FBF1Q8TES7 1133 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 SRCIN1Q9C0H9 1055 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 ZNF576Q9H609 170 aa6.66□□□□□ -1.34
VPS50-217ENST00000485140 CARNS1A5YM72 827 aa6.65□□□□□ -1.34
VPS50-217ENST00000485140 SUPT5HO00267 1087 aaKnown RBP6.65□□□□□ -1.34
VPS50-217ENST00000485140 GIPC1O14908 333 aa6.65□□□□□ -1.34
VPS50-217ENST00000485140 POLR3DP05423 398 aaPredicted RBP6.65□□□□□ -1.34
VPS50-217ENST00000485140 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
VPS50-217ENST00000485140 RAD18Q9NS91 495 aa6.65□□□□□ -1.34
VPS50-217ENST00000485140 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
VPS50-217ENST00000485140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.65□□□□□ -1.34
VPS50-217ENST00000485140 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 HMX2A2RU54 273 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 GRIA4P48058 902 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 EZH1Q92800 747 aaPredicted RBP6.64□□□□□ -1.35
VPS50-217ENST00000485140 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 NIF3L1Q9GZT8 377 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 NPHS2Q9NP85 383 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 KRT82Q9NSB4 513 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
VPS50-217ENST00000485140 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 ADH5P11766 374 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 MAOBP27338 520 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 ORC1Q13415 861 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 OSBPL1AQ9BXW6 950 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
VPS50-217ENST00000485140 GPR182O15218 404 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 DUSP27Q5VZP5 1158 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 SCARA3Q6AZY7 606 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 DTX1Q86Y01 620 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 C2CD4AQ8NCU7 369 aaPredicted RBP6.62□□□□□ -1.35
VPS50-217ENST00000485140 SHKBP1Q8TBC3 707 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
VPS50-217ENST00000485140 METTL12A8MUP2 240 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 WDR64B1ANS9 1081 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 TGFB1P01137 390 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 IGHA2P01877 340 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 MAPK1P28482 360 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 SSTR4P31391 388 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 ATP2B2Q01814 1243 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 PDE3AQ14432 1141 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 SPRED3Q2MJR0 410 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 ALG1LQ6GMV1 187 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 FRMD6Q96NE9 622 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 CEP44Q9C0F1 390 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 ATXN3LQ9H3M9 355 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 PPM1HQ9ULR3 514 aa6.61□□□□□ -1.35
VPS50-217ENST00000485140 TREHO43280 583 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 WNT11O96014 354 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 SPINK2P20155 84 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 TMEM39AQ9NV64 488 aa6.6□□□□□ -1.35
VPS50-217ENST00000485140 FOSL1P15407 271 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 GSTT1P30711 240 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 IRAK1P51617 712 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 HGSNATQ68CP4 663 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 TMC7Q7Z402 723 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 ANKRD24Q8TF21 1146 aa6.59□□□□□ -1.35
VPS50-217ENST00000485140 FBXL18Q96ME1 805 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms