RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
RPGR-208ENST00000482855 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
RPGR-208ENST00000482855 ZNF202O95125 648 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 ANXA1P04083 346 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 HMGB1P09429 215 aaKnown RBP12.71□□□□□ -0.37
RPGR-208ENST00000482855 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
RPGR-208ENST00000482855 MCM6Q14566 821 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 ISM2Q6H9L7 571 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 DHX58Q96C10 678 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 SLIT3O75094 1523 aa12.71□□□□□ -0.37
RPGR-208ENST00000482855 COL15A1P39059 1388 aa12.71□□□□□ -0.38
RPGR-208ENST00000482855 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 HOXB7P09629 217 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 MYL5Q02045 173 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 HDXQ7Z353 690 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 SPTLC2O15270 562 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 ERLIN1O75477 346 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 YEATS4O95619 227 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 CCDC12Q8WUD4 166 aaPredicted RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 HNRNPLLQ8WVV9 542 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
RPGR-208ENST00000482855 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
RPGR-208ENST00000482855 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
RPGR-208ENST00000482855 CHMP4BP1P59074 171 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
RPGR-208ENST00000482855 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 STOX1Q6ZVD7 989 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 PDILTQ8N807 584 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 ZSWIM4Q9H7M6 989 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
RPGR-208ENST00000482855 STX10O60499 249 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 PFKFB1P16118 471 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 PTPN21Q16825 1174 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
RPGR-208ENST00000482855 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 MYO1BO43795 1136 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
RPGR-208ENST00000482855 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
RPGR-208ENST00000482855 FOXR1Q6PIV2 292 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 FAN1Q9Y2M0 1017 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 LMO7Q8WWI1 1683 aa12.68□□□□□ -0.38
RPGR-208ENST00000482855 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 HSP90B2PQ58FF3 399 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 MSL3Q8N5Y2 521 aaKnown RBP12.67□□□□□ -0.38
RPGR-208ENST00000482855 SUCLG2Q96I99 432 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
RPGR-208ENST00000482855 ZNF609O15014 1411 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 SLIT2O94813 1529 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 USP5P45974 858 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 TEFQ10587 303 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
RPGR-208ENST00000482855 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
RPGR-208ENST00000482855 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
RPGR-208ENST00000482855 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
RPGR-208ENST00000482855 GRM8O00222 908 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 CMA1P23946 247 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 CEP112Q8N8E3 955 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 DRC1Q96MC2 740 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 NCAPGQ9BPX3 1015 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 ANKZF1Q9H8Y5 726 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 CUTAO60888 179 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
RPGR-208ENST00000482855 CORO7P57737 925 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 KSR2Q6VAB6 950 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 ZNF274Q96GC6 653 aaPredicted RBP12.66□□□□□ -0.38
RPGR-208ENST00000482855 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms