RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
LIMK2-209ENST00000482270 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
LIMK2-209ENST00000482270 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.11□□□□□ -0.47
LIMK2-209ENST00000482270 DYRK1BQ9Y463 629 aa12.11□□□□□ -0.47
LIMK2-209ENST00000482270 DPYDQ12882 1025 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 MPRIPQ6WCQ1 1025 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 RUBCNLQ9H714 662 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-209ENST00000482270 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
LIMK2-209ENST00000482270 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 GPR25O00155 361 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 SLC9A9Q8IVB4 645 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 SIX5Q8N196 739 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
LIMK2-209ENST00000482270 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
LIMK2-209ENST00000482270 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 SPG7Q9UQ90 795 aa12.09□□□□□ -0.47
LIMK2-209ENST00000482270 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 PTK7Q13308 1070 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 CC2D1BQ5T0F9 858 aaKnown RBP12.08□□□□□ -0.48
LIMK2-209ENST00000482270 SV2AQ7L0J3 742 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 IGSF1Q8N6C5 1336 aa12.08□□□□□ -0.48
LIMK2-209ENST00000482270 SCN11AQ9UI33 1791 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 A0A1B0GTH6 734 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 MTFR1Q15390 333 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-209ENST00000482270 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-209ENST00000482270 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 SCHIP1Q9P0W5 487 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-209ENST00000482270 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-209ENST00000482270 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
LIMK2-209ENST00000482270 F11P03951 625 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 PHKG2P15735 406 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 MSX1P28360 303 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 SEC13P55735 322 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 DBN1Q16643 649 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 PIGBQ92521 554 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 GTPBP3Q969Y2 492 aaKnown RBP12.06□□□□□ -0.48
LIMK2-209ENST00000482270 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 ZNF232Q9UNY5 417 aa12.06□□□□□ -0.48
LIMK2-209ENST00000482270 CDK2AP1O14519 115 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 VSIG8P0DPA2 414 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 EPHA4P54764 986 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 ANKMY2Q8IV38 441 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
LIMK2-209ENST00000482270 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-209ENST00000482270 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
LIMK2-209ENST00000482270 DKK1O94907 266 aa12.04□□□□□ -0.48
LIMK2-209ENST00000482270 SH3PXD2AQ5TCZ1 1133 aa12.04□□□□□ -0.48
LIMK2-209ENST00000482270 SULT6B1Q6IMI4 303 aa12.04□□□□□ -0.48
LIMK2-209ENST00000482270 COL25A1Q9BXS0 654 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-209ENST00000482270 NUCKS1Q9H1E3 243 aaKnown RBP12.04□□□□□ -0.48
LIMK2-209ENST00000482270 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
LIMK2-209ENST00000482270 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-209ENST00000482270 IL13P35225 146 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 MTHFSP49914 203 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 ZNF530Q6P9A1 599 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-209ENST00000482270 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 PGBD3Q8N328 593 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 ZDHHC1Q8WTX9 485 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
LIMK2-209ENST00000482270 ARSJQ5FYB0 599 aaPredicted RBP12.02□□□□□ -0.49
LIMK2-209ENST00000482270 RNFT1Q5M7Z0 435 aa12.02□□□□□ -0.49
LIMK2-209ENST00000482270 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
LIMK2-209ENST00000482270 ARID3AQ99856 593 aa12.02□□□□□ -0.49
LIMK2-209ENST00000482270 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.49
LIMK2-209ENST00000482270 TJP1Q07157 1748 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 H7C1W4 665 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 HMOX1P09601 288 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 TXLNAP40222 546 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 FOXK2Q01167 660 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
LIMK2-209ENST00000482270 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
LIMK2-209ENST00000482270 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
LIMK2-209ENST00000482270 NANOS1Q8WY41 292 aaKnown RBP12.01□□□□□ -0.49
LIMK2-209ENST00000482270 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
LIMK2-209ENST00000482270 ARXQ96QS3 562 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 CHD4Q14839 1912 aa12.01□□□□□ -0.49
LIMK2-209ENST00000482270 PPP1R12BO60237 982 aaPredicted RBP12□□□□□ -0.49
LIMK2-209ENST00000482270 ATP4AP20648 1035 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 KRT76Q01546 638 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 DDX10Q13206 875 aaKnown RBP12□□□□□ -0.49
LIMK2-209ENST00000482270 AMIGO3Q86WK7 504 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 ZNF295-AS1Q8N0V1 137 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 SCG3Q8WXD2 468 aaKnown RBP12□□□□□ -0.49
LIMK2-209ENST00000482270 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
LIMK2-209ENST00000482270 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
LIMK2-209ENST00000482270 C4AP0C0L4 1744 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms