RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 KRTAP4-2Q9BYR5 136 aa6.53□□□□□ -1.36
SPC25-204ENST00000479309 NIF3L1Q9GZT8 377 aa6.53□□□□□ -1.36
SPC25-204ENST00000479309 B3GALT4O96024 378 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 BMP3P12645 472 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 CD97P48960 835 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 GSTM4Q03013 218 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
SPC25-204ENST00000479309 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 CSRNP1Q96S65 589 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 ZNF576Q9H609 170 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 ZFYVE1Q9HBF4 777 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 NPHS2Q9NP85 383 aa6.52□□□□□ -1.37
SPC25-204ENST00000479309 SYNGAP1Q96PV0 1343 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 HMX2A2RU54 273 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 CYP11A1P05108 521 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 BEND4Q6ZU67 534 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 USP26Q9BXU7 913 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 EHD4Q9H223 541 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 DCTN4Q9UJW0 460 aa6.51□□□□□ -1.37
SPC25-204ENST00000479309 KIAA1324LA8MWY0 1029 aaPredicted RBP6.5□□□□□ -1.37
SPC25-204ENST00000479309 DSC3Q14574 896 aa6.5□□□□□ -1.37
SPC25-204ENST00000479309 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
SPC25-204ENST00000479309 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
SPC25-204ENST00000479309 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
SPC25-204ENST00000479309 TRIM56Q9BRZ2 755 aaKnown RBP6.5□□□□□ -1.37
SPC25-204ENST00000479309 TRAK1Q9UPV9 953 aa6.5□□□□□ -1.37
SPC25-204ENST00000479309 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 PRR19A6NJB7 356 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 COBLO75128 1261 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 MAP4P27816 1152 aaKnown RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 SOX4Q06945 474 aaPredicted RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 POU4F3Q15319 338 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 TMC7Q7Z402 723 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
SPC25-204ENST00000479309 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 C2CD4AQ8NCU7 369 aaPredicted RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 EZH1Q92800 747 aaPredicted RBP6.49□□□□□ -1.37
SPC25-204ENST00000479309 TREHO43280 583 aa6.48□□□□□ -1.37
SPC25-204ENST00000479309 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
SPC25-204ENST00000479309 MAOBP27338 520 aa6.48□□□□□ -1.37
SPC25-204ENST00000479309 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
SPC25-204ENST00000479309 GSX1Q9H4S2 264 aaPredicted RBP6.48□□□□□ -1.37
SPC25-204ENST00000479309 TGFB1P01137 390 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 CTSBP07858 339 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 GRM2Q14416 872 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
SPC25-204ENST00000479309 SGO2Q562F6 1265 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 KCNF1Q9H3M0 494 aa6.47□□□□□ -1.37
SPC25-204ENST00000479309 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
SPC25-204ENST00000479309 MED26O95402 600 aa6.46□□□□□ -1.38
SPC25-204ENST00000479309 ADH5P11766 374 aa6.46□□□□□ -1.38
SPC25-204ENST00000479309 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
SPC25-204ENST00000479309 DRD2P14416 443 aa6.46□□□□□ -1.38
SPC25-204ENST00000479309 KCNA1Q09470 495 aa6.46□□□□□ -1.38
SPC25-204ENST00000479309 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
SPC25-204ENST00000479309 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
SPC25-204ENST00000479309 SPINK2P20155 84 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 GRIK1P39086 918 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 PLCB3Q01970 1234 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 ENOX2Q16206 610 aaKnown RBP6.45□□□□□ -1.38
SPC25-204ENST00000479309 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 SHKBP1Q8TBC3 707 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 PPP4R2Q9NY27 417 aa6.45□□□□□ -1.38
SPC25-204ENST00000479309 BIN2Q9UBW5 565 aaPredicted RBP6.45□□□□□ -1.38
SPC25-204ENST00000479309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
SPC25-204ENST00000479309 FAM95CA0A1B0GW59 222 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 SSTR4P31391 388 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 USP11P51784 963 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 FAAP100Q0VG06 881 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 DTX1Q86Y01 620 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 GIMAP7Q8NHV1 300 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 TRAIPQ9BWF2 469 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 YIPF2Q9BWQ6 316 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 NLRP2Q9NX02 1062 aa6.44□□□□□ -1.38
SPC25-204ENST00000479309 AOC2O75106 756 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 ECEL1O95672 775 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 MAPK1P28482 360 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 PAOXQ6QHF9 649 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 FBF1Q8TES7 1133 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 KRT82Q9NSB4 513 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 ACTL7BQ9Y614 415 aa6.43□□□□□ -1.38
SPC25-204ENST00000479309 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 F13BP05160 661 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 RXRBP28702 533 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 FMR1Q06787 632 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPC25-204ENST00000479309 ANKRD24Q8TF21 1146 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 GATA6Q92908 595 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 MFSD14AQ96MC6 490 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 ASB16Q96NS5 453 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 SRCIN1Q9C0H9 1055 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 ACSS3Q9H6R3 686 aa6.42□□□□□ -1.38
SPC25-204ENST00000479309 PIM2Q9P1W9 311 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms