RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 HOMER1Q86YM7 354 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 WDR75Q8IWA0 830 aaKnown RBP7.51□□□□□ -1.21
RC3H1-204ENST00000479099 PPM1EQ8WY54 764 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 CEP63Q96MT8 703 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 DEPDC7Q96QD5 511 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 ZNF700Q9H0M5 742 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
RC3H1-204ENST00000479099 ARNT2Q9HBZ2 717 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 CNTN3Q9P232 1028 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 NRBP1Q9UHY1 535 aa7.51□□□□□ -1.21
RC3H1-204ENST00000479099 ELOA3CA0A087WX78 387 aaPredicted RBP7.5□□□□□ -1.21
RC3H1-204ENST00000479099 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
RC3H1-204ENST00000479099 TSPAN6O43657 245 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 BAG6P46379 1132 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 ELOA3BQ3SY89 546 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 TTC39BQ5VTQ0 682 aaPredicted RBP7.5□□□□□ -1.21
RC3H1-204ENST00000479099 SYT9Q86SS6 491 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 ELOA3Q8NG57 546 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 SEC16BQ96JE7 1060 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 HINFPQ9BQA5 517 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 TMX4Q9H1E5 349 aaPredicted RBP7.5□□□□□ -1.21
RC3H1-204ENST00000479099 KANSL2Q9H9L4 492 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
RC3H1-204ENST00000479099 FAM221BA6H8Z2 402 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 FZD6O60353 706 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 SIN3BO75182 1162 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 HCLS1P14317 486 aaPredicted RBP7.49□□□□□ -1.21
RC3H1-204ENST00000479099 ALAS2P22557 587 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 RAB33AQ14088 237 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 HLTFQ14527 1009 aaKnown RBP eCLIP7.49□□□□□ -1.21
RC3H1-204ENST00000479099 NAA30Q147X3 362 aaPredicted RBP7.49□□□□□ -1.21
RC3H1-204ENST00000479099 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
RC3H1-204ENST00000479099 SYCP2LQ5T4T6 812 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 INO80BQ9C086 356 aaPredicted RBP7.49□□□□□ -1.21
RC3H1-204ENST00000479099 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 ANKIB1Q9P2G1 1089 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 ANAPC4Q9UJX5 808 aa7.49□□□□□ -1.21
RC3H1-204ENST00000479099 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 KLF4O43474 513 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 LGR5O75473 907 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 FOSP01100 380 aaPredicted RBP7.48□□□□□ -1.21
RC3H1-204ENST00000479099 SSBP05455 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
RC3H1-204ENST00000479099 MYL1P05976 194 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 COL6A1P12109 1028 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 MZF1P28698 734 aaPredicted RBP7.48□□□□□ -1.21
RC3H1-204ENST00000479099 SFSWAPQ12872 951 aaKnown RBP7.48□□□□□ -1.21
RC3H1-204ENST00000479099 BRD3Q15059 726 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 MAPRE1Q15691 268 aaKnown RBP7.48□□□□□ -1.21
RC3H1-204ENST00000479099 EFCAB2Q5VUJ9 269 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 ANKS3Q6ZW76 656 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 KRT26Q7Z3Y9 468 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 FEZ1Q99689 392 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 MDFIQ99750 246 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 ARPC5LQ9BPX5 153 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 PAGR1Q9BTK6 254 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 TRIM55Q9BYV6 548 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 PHACTR1Q9C0D0 580 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 HCN4Q9Y3Q4 1203 aa7.48□□□□□ -1.21
RC3H1-204ENST00000479099 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 C1QTNF9BB2RNN3 333 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 NRDCO43847 1150 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 COPB2P35606 906 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 USP5P45974 858 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 EPHB1P54762 984 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 PPP2R5AQ15172 486 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 RINLQ6ZS11 566 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 SDR16C5Q8N3Y7 309 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
RC3H1-204ENST00000479099 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
RC3H1-204ENST00000479099 EPB41L2O43491 1005 aaKnown RBP7.46□□□□□ -1.22
RC3H1-204ENST00000479099 PPP1R12BO60237 982 aaPredicted RBP7.46□□□□□ -1.22
RC3H1-204ENST00000479099 CDKN1CP49918 316 aaPredicted RBP7.46□□□□□ -1.22
RC3H1-204ENST00000479099 KCNQ4P56696 695 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 POU5F1Q01860 360 aaKnown RBP7.46□□□□□ -1.22
RC3H1-204ENST00000479099 NEUROD1Q13562 356 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 C16orf86Q6ZW13 317 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 CD163Q86VB7 1156 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 STAG2Q8N3U4 1231 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 LILRB2Q8N423 598 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 TNFRSF25Q93038 417 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 SLC30A3Q99726 388 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 BRD7Q9NPI1 651 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 TMEM260Q9NX78 707 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 USP31Q70CQ4 1352 aa7.46□□□□□ -1.22
RC3H1-204ENST00000479099 ANP32CO43423 234 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 BPNT1O95861 308 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 PTMAP06454 111 aaKnown RBP7.45□□□□□ -1.22
RC3H1-204ENST00000479099 CHRNA4P43681 627 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 SPEM2Q0P670 501 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 RAPGEF1Q13905 1077 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 SUSD3Q96L08 255 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 PLVAPQ9BX97 442 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms