RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 MAGEB6Q8N7X4 407 aa12.96□□□□□ -0.34
HLA-DMB-260ENST00000477537 AIDAQ96BJ3 306 aa12.96□□□□□ -0.34
HLA-DMB-260ENST00000477537 NBPF3Q9H094 633 aa12.96□□□□□ -0.34
HLA-DMB-260ENST00000477537 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 LIG1P18858 919 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 CLCN1P35523 988 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 TRDNQ13061 729 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 TBC1D10CQ8IV04 446 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 STRBPQ96SI9 672 aaKnown RBP12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 COL4A1P02462 1669 aa12.95□□□□□ -0.34
HLA-DMB-260ENST00000477537 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 MBD4O95243 580 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
HLA-DMB-260ENST00000477537 TAF1P21675 1872 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 ALX1Q15699 326 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
HLA-DMB-260ENST00000477537 CHD4Q14839 1912 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 HS1BP3Q53T59 392 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 A0A1B0GUL6 1792 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 CEBPZQ03701 1054 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 NKX2-3Q8TAU0 364 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 EPB41L4AQ9HCS5 686 aaPredicted RBP12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
HLA-DMB-260ENST00000477537 NEDD4P46934 1319 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 B4E1Z4 1266 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 CPLX1O14810 134 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 CAMK4Q16566 473 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 MAP3K11Q16584 847 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 NAPBQ9H115 298 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 IQSEC3Q9UPP2 1182 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 ZMYM6O95789 1325 aa12.91□□□□□ -0.34
HLA-DMB-260ENST00000477537 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 PRKAB2O43741 272 aa12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 FTOQ9C0B1 505 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-260ENST00000477537 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 RPS6KA4O75676 772 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 CTDSPL2Q05D32 466 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 C8orf76Q96K31 380 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 INCENPQ9NQS7 918 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 GNL3LQ9NVN8 582 aaKnown RBP12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 NARFQ9UHQ1 456 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.35
HLA-DMB-260ENST00000477537 RGL2O15211 777 aa12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 GNPATO15228 680 aa12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 NR1I2O75469 434 aa12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 GNAT2P19087 354 aa12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 GYG1P46976 350 aa12.89□□□□□ -0.35
HLA-DMB-260ENST00000477537 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms