RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
COL4A6-206ENST00000477085 DDIT3P35638 169 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
COL4A6-206ENST00000477085 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 AK2P54819 239 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
COL4A6-206ENST00000477085 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
COL4A6-206ENST00000477085 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
COL4A6-206ENST00000477085 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 PATL2C9JE40 543 aaKnown RBP17.24■□□□□ 0.35
COL4A6-206ENST00000477085 DPEP1P16444 411 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
COL4A6-206ENST00000477085 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
COL4A6-206ENST00000477085 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 NBPF3Q9H094 633 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
COL4A6-206ENST00000477085 RPS6KB1P23443 525 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 HAND2P61296 217 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
COL4A6-206ENST00000477085 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 E7EWF7 191 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 PSMA5P28066 241 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
COL4A6-206ENST00000477085 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
COL4A6-206ENST00000477085 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 CTNNA3Q9UI47 895 aa17.23■□□□□ 0.35
COL4A6-206ENST00000477085 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 APPP05067 770 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 MCM2P49736 904 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 KRT32Q14532 448 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 ALX1Q15699 326 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
COL4A6-206ENST00000477085 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
COL4A6-206ENST00000477085 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
COL4A6-206ENST00000477085 C21orf2O43822 256 aa17.21■□□□□ 0.35
COL4A6-206ENST00000477085 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
COL4A6-206ENST00000477085 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
COL4A6-206ENST00000477085 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 CUL4AQ13619 759 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 CHD4Q14839 1912 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 KIF13BQ9NQT8 1826 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 LARGE1O95461 756 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 GTF2IP78347 998 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
COL4A6-206ENST00000477085 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
COL4A6-206ENST00000477085 ZNF213O14771 459 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 GNAT2P19087 354 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
COL4A6-206ENST00000477085 DIXDC1Q155Q3 683 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL4A6-206ENST00000477085 LIMCH1Q9UPQ0 1083 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 KIAA1551Q9HCM1 1747 aa17.19■□□□□ 0.34
COL4A6-206ENST00000477085 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 PTGER2P43116 358 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 DZIP1Q86YF9 867 aaKnown RBP17.18■□□□□ 0.34
COL4A6-206ENST00000477085 CERS5Q8N5B7 392 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 EYA3Q99504 573 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 INCENPQ9NQS7 918 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 TPCN1Q9ULQ1 816 aa17.18■□□□□ 0.34
COL4A6-206ENST00000477085 POLD1P28340 1107 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 TGFB2P61812 414 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
COL4A6-206ENST00000477085 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 NAPBQ9H115 298 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
COL4A6-206ENST00000477085 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
COL4A6-206ENST00000477085 ME3Q16798 604 aa17.16■□□□□ 0.34
COL4A6-206ENST00000477085 AOC3Q16853 763 aa17.16■□□□□ 0.34
COL4A6-206ENST00000477085 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
COL4A6-206ENST00000477085 LAMA4Q16363 1823 aa17.16■□□□□ 0.34
COL4A6-206ENST00000477085 IGSF3O75054 1194 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms