RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 CCDC160A6NGH7 325 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 RRAGBQ5VZM2 374 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 MMS19Q96T76 1030 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 OLA1Q9NTK5 396 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 PSDA5PKW4 1024 aaPredicted RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 CFBP00751 764 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 PDE4DQ08499 809 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 COPS6Q7L5N1 327 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 SYNJ2BP-COX16A0A087WUM0 186 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 DCAF15Q66K64 600 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 PSPC1Q8WXF1 523 aaKnown RBP7.54□□□□□ -1.2
TTC3-215ENST00000476784 DPF3Q92784 378 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 COX16Q9P0S2 106 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 FRMD4BQ9Y2L6 1034 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 ANKRD50Q9ULJ7 1429 aa7.54□□□□□ -1.2
TTC3-215ENST00000476784 NBPF1Q3BBV0 1214 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
TTC3-215ENST00000476784 TMCO5AQ8N6Q1 288 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 FAM170AA1A519 330 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 DYNC1I1O14576 645 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CD19P15391 556 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MX1P20591 662 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CCDC6Q16204 474 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 BSPRYQ5W0U4 402 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MAP3K7O43318 606 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 ZSCAN20P17040 1043 aaPredicted RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 RAPGEF1Q13905 1077 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CASC4Q6P4E1 433 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 YAF2Q8IY57 180 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 GBP3Q9H0R5 595 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 GPBP1L1Q9HC44 474 aaPredicted RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 SMIM23A6NLE4 172 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MCM7P33993 719 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MTRQ99707 1265 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MAN1A1P33908 653 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CCNA1P78396 465 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 FAM43AQ8N2R8 423 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 DDX12PQ92771 950 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 SUGCTQ9HAC7 445 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 RTEL1Q9NZ71 1219 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 ZHX1Q9UKY1 873 aaPredicted RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 SLC8A2Q9UPR5 921 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 MAST3O60307 1309 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 AKR1B10O60218 316 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 PDIA4P13667 645 aaKnown RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 SFPQP23246 707 aaKnown RBP eCLIP7.53□□□□□ -1.2
TTC3-215ENST00000476784 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
TTC3-215ENST00000476784 HSP90AA4PQ58FG1 418 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 CCDC25Q86WR0 208 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 AKNAQ7Z591 1439 aa7.53□□□□□ -1.2
TTC3-215ENST00000476784 PI4KAP2A4QPH2 592 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 ZBTB43O43298 467 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 PI4KAP1Q8N8J0 262 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.2
TTC3-215ENST00000476784 FAM107BQ9H098 131 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 PNMA2Q9UL42 364 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.2
TTC3-215ENST00000476784 ARHGEF35A5YM69 484 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 ALAS1P13196 640 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 ZNF18P17022 549 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 CHD1LQ86WJ1 897 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 NOX5Q96PH1 765 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 UBN1Q9NPG3 1134 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 ST7Q9NRC1 585 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 PSMD6Q15008 389 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 PRKRIP1Q9H875 184 aaPredicted RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 ATP2A2P16615 1042 aaKnown RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 ERCC3P19447 782 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 PTGS1P23219 599 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 FAM182BQ5T319 152 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 FSIP1Q8NA03 581 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 NCAPGQ9BPX3 1015 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 PARP2Q9UGN5 583 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 DKC1O60832 514 aaKnown RBP eCLIP7.52□□□□□ -1.211e-6■■■■■ 30
TTC3-215ENST00000476784 HOXD10P28358 340 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 APOBRQ0VD83 1088 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 FLIIQ13045 1269 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 NCAPH2Q6IBW4 605 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 NAP1L3Q99457 506 aaPredicted RBP7.52□□□□□ -1.21
TTC3-215ENST00000476784 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 HSPA1LP34931 641 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
TTC3-215ENST00000476784 LRRC2Q9BYS8 371 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 CNPY2Q9Y2B0 182 aa7.52□□□□□ -1.21
TTC3-215ENST00000476784 KLF18A0A0U1RQI7 1052 aa7.51□□□□□ -1.21
TTC3-215ENST00000476784 SHTN1A0MZ66 631 aa7.51□□□□□ -1.21
TTC3-215ENST00000476784 OPA1O60313 960 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms