RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
RPGR-207ENST00000476559 BEND4Q6ZU67 534 aa10.53□□□□□ -0.72
RPGR-207ENST00000476559 SMG8Q8ND04 991 aaKnown RBP10.53□□□□□ -0.72
RPGR-207ENST00000476559 TRAIPQ9BWF2 469 aa10.53□□□□□ -0.72
RPGR-207ENST00000476559 ZFP64Q9NPA5 681 aa10.53□□□□□ -0.72
RPGR-207ENST00000476559 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
RPGR-207ENST00000476559 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
RPGR-207ENST00000476559 TREHO43280 583 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 ECEL1O95672 775 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 CYP11A1P05108 521 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 SGO2Q562F6 1265 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 GLIS3Q8NEA6 775 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
RPGR-207ENST00000476559 RNF112Q9ULX5 631 aa10.52□□□□□ -0.73
RPGR-207ENST00000476559 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
RPGR-207ENST00000476559 TIAF1O95411 115 aa10.51□□□□□ -0.73
RPGR-207ENST00000476559 CLEC10AQ8IUN9 316 aa10.51□□□□□ -0.73
RPGR-207ENST00000476559 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
RPGR-207ENST00000476559 FAM83CQ9BQN1 747 aa10.51□□□□□ -0.73
RPGR-207ENST00000476559 SUGCTQ9HAC7 445 aa10.51□□□□□ -0.73
RPGR-207ENST00000476559 GSC2O15499 205 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 RXRBP28702 533 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 FCGRTP55899 365 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 NFIAQ12857 509 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 LRP8Q14114 963 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 CORO1BQ9BR76 489 aa10.5□□□□□ -0.73
RPGR-207ENST00000476559 HYAL3O43820 417 aaPredicted RBP10.49□□□□□ -0.73
RPGR-207ENST00000476559 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
RPGR-207ENST00000476559 MAPK8P45983 427 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
RPGR-207ENST00000476559 FAAP100Q0VG06 881 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 ENOX2Q16206 610 aaKnown RBP10.49□□□□□ -0.73
RPGR-207ENST00000476559 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPGR-207ENST00000476559 RNF43Q68DV7 783 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 DTHD1Q6ZMT9 781 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 BCO2Q9BYV7 579 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 HIF3AQ9Y2N7 669 aa10.49□□□□□ -0.73
RPGR-207ENST00000476559 USP11P51784 963 aa10.48□□□□□ -0.73
RPGR-207ENST00000476559 SOX4Q06945 474 aaPredicted RBP10.48□□□□□ -0.73
RPGR-207ENST00000476559 ZSCAN29Q8IWY8 852 aaPredicted RBP10.48□□□□□ -0.73
RPGR-207ENST00000476559 RAD18Q9NS91 495 aa10.48□□□□□ -0.73
RPGR-207ENST00000476559 SSTR4P31391 388 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 NXPE4Q6UWF7 544 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 C2CD4AQ8NCU7 369 aaPredicted RBP10.47□□□□□ -0.73
RPGR-207ENST00000476559 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 SETDB2Q96T68 719 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
RPGR-207ENST00000476559 TGFB1P01137 390 aa10.46□□□□□ -0.73
RPGR-207ENST00000476559 ADH5P11766 374 aa10.46□□□□□ -0.73
RPGR-207ENST00000476559 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
RPGR-207ENST00000476559 RPS26P11Q5JNZ5 115 aaPredicted RBP10.46□□□□□ -0.73
RPGR-207ENST00000476559 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
RPGR-207ENST00000476559 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.73
RPGR-207ENST00000476559 ZDHHC13Q8IUH4 622 aa10.45□□□□□ -0.74
RPGR-207ENST00000476559 ASB16Q96NS5 453 aa10.45□□□□□ -0.74
RPGR-207ENST00000476559 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
RPGR-207ENST00000476559 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
RPGR-207ENST00000476559 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 NFKBIBQ15653 356 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 HP1BP3Q5SSJ5 553 aaPredicted RBP10.44□□□□□ -0.74
RPGR-207ENST00000476559 NBPF11Q86T75 865 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 MFSD14AQ96MC6 490 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 ZFYVE1Q9HBF4 777 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 GPN3Q9UHW5 284 aaPredicted RBP10.44□□□□□ -0.74
RPGR-207ENST00000476559 WWC3Q9ULE0 1092 aa10.44□□□□□ -0.74
RPGR-207ENST00000476559 FAM95CA0A1B0GW59 222 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 FMR1Q06787 632 aaKnown RBP eCLIP10.43□□□□□ -0.74
RPGR-207ENST00000476559 DYMQ7RTS9 669 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 SHKBP1Q8TBC3 707 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 AP4E1Q9UPM8 1137 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 ACTL7BQ9Y614 415 aa10.43□□□□□ -0.74
RPGR-207ENST00000476559 WDR64B1ANS9 1081 aa10.42□□□□□ -0.74
RPGR-207ENST00000476559 FBXL6Q8N531 539 aa10.42□□□□□ -0.74
RPGR-207ENST00000476559 PCMTD2Q9NV79 361 aa10.42□□□□□ -0.74
RPGR-207ENST00000476559 AOC2O75106 756 aa10.41□□□□□ -0.74
RPGR-207ENST00000476559 MED26O95402 600 aa10.41□□□□□ -0.74
RPGR-207ENST00000476559 LIG1P18858 919 aa10.41□□□□□ -0.74
RPGR-207ENST00000476559 RAB6AP20340 208 aa10.41□□□□□ -0.74
RPGR-207ENST00000476559 CCDC86Q9H6F5 360 aaKnown RBP10.41□□□□□ -0.74
RPGR-207ENST00000476559 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
RPGR-207ENST00000476559 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
RPGR-207ENST00000476559 WDR89Q96FK6 387 aaPredicted RBP10.4□□□□□ -0.74
RPGR-207ENST00000476559 WDR18Q9BV38 432 aa10.4□□□□□ -0.74
RPGR-207ENST00000476559 FAM105AQ9NUU6 356 aa10.4□□□□□ -0.74
RPGR-207ENST00000476559 TMEM39AQ9NV64 488 aa10.4□□□□□ -0.74
RPGR-207ENST00000476559 PRR19A6NJB7 356 aa10.39□□□□□ -0.75
RPGR-207ENST00000476559 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
RPGR-207ENST00000476559 CD97P48960 835 aa10.39□□□□□ -0.75
RPGR-207ENST00000476559 PPP2R3AQ06190 1150 aa10.39□□□□□ -0.75
RPGR-207ENST00000476559 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
RPGR-207ENST00000476559 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
RPGR-207ENST00000476559 COBLO75128 1261 aa10.38□□□□□ -0.75
RPGR-207ENST00000476559 P4HBP07237 508 aaKnown RBP10.38□□□□□ -0.75
RPGR-207ENST00000476559 NFICP08651 508 aa10.38□□□□□ -0.75
RPGR-207ENST00000476559 PDIA4P13667 645 aaKnown RBP10.38□□□□□ -0.75
RPGR-207ENST00000476559 ASPAP45381 313 aa10.38□□□□□ -0.75
RPGR-207ENST00000476559 FBF1Q8TES7 1133 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms