RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
RPGR-207ENST00000476559 CHIC1Q5VXU3 224 aa33.83■■■■□ 3.01
RPGR-207ENST00000476559 PHF23Q9BUL5 403 aaPredicted RBP29.75■■■□□ 2.35
RPGR-207ENST00000476559 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
RPGR-207ENST00000476559 FOXD1Q16676 465 aa27.7■■■□□ 2.02
RPGR-207ENST00000476559 PLPPR3Q6T4P5 718 aa27.3■■□□□ 1.96
RPGR-207ENST00000476559 PPP6R1Q9UPN7 881 aa26.4■■□□□ 1.82
RPGR-207ENST00000476559 ADRA2BP18089 450 aa26.37■■□□□ 1.81
RPGR-207ENST00000476559 PIAS4Q8N2W9 510 aaPredicted RBP26.05■■□□□ 1.76
RPGR-207ENST00000476559 MSH5O43196 834 aa25.64■■□□□ 1.7
RPGR-207ENST00000476559 MAPK8IP2Q13387 824 aaPredicted RBP24.05■■□□□ 1.44
RPGR-207ENST00000476559 POTEDQ86YR6 584 aa24.05■■□□□ 1.44
RPGR-207ENST00000476559 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
RPGR-207ENST00000476559 PPP4R3CPQ6ZMV5 832 aa24.04■■□□□ 1.44
RPGR-207ENST00000476559 DMRT2Q9Y5R5 561 aa23.69■■□□□ 1.38
RPGR-207ENST00000476559 CNKSR2Q8WXI2 1034 aa23.42■■□□□ 1.34
RPGR-207ENST00000476559 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
RPGR-207ENST00000476559 KCNA4P22459 653 aa23.1■■□□□ 1.29
RPGR-207ENST00000476559 HOXD11P31277 338 aaPredicted RBP23.04■■□□□ 1.28
RPGR-207ENST00000476559 RNF216Q9NWF9 866 aaPredicted RBP23.04■■□□□ 1.28
RPGR-207ENST00000476559 NPM3O75607 178 aaKnown RBP22.97■■□□□ 1.27
RPGR-207ENST00000476559 DCAF8L1A6NGE4 600 aa22.8■■□□□ 1.24
RPGR-207ENST00000476559 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
RPGR-207ENST00000476559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
RPGR-207ENST00000476559 RNF39Q9H2S5 420 aa21.95■■□□□ 1.1
RPGR-207ENST00000476559 SLC4A1APQ9BWU0 796 aaKnown RBP21.91■■□□□ 1.1
RPGR-207ENST00000476559 SLC4A2P04920 1241 aa21.78■■□□□ 1.08
RPGR-207ENST00000476559 CACNB1Q02641 598 aaPredicted RBP21.7■■□□□ 1.06
RPGR-207ENST00000476559 C1QBPQ07021 282 aaKnown RBP21.64■■□□□ 1.05
RPGR-207ENST00000476559 U3KPZ7 1027 aaPredicted RBP21.61■■□□□ 1.05
RPGR-207ENST00000476559 FOXD4L1Q9NU39 408 aa21.32■■□□□ 1
RPGR-207ENST00000476559 ZBTB22O15209 634 aa21.25■□□□□ 0.99
RPGR-207ENST00000476559 MYCNP04198 464 aaPredicted RBP21.2■□□□□ 0.98
RPGR-207ENST00000476559 SPINK5Q9NQ38 1064 aaPredicted RBP21.16■□□□□ 0.98
RPGR-207ENST00000476559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
RPGR-207ENST00000476559 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
RPGR-207ENST00000476559 CAPN15O75808 1086 aa21.09■□□□□ 0.97
RPGR-207ENST00000476559 SAMD1Q6SPF0 538 aaPredicted RBP21.08■□□□□ 0.97
RPGR-207ENST00000476559 APLP2Q06481 763 aa21.01■□□□□ 0.95
RPGR-207ENST00000476559 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
RPGR-207ENST00000476559 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
RPGR-207ENST00000476559 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
RPGR-207ENST00000476559 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
RPGR-207ENST00000476559 DSG3P32926 999 aa20.78■□□□□ 0.92
RPGR-207ENST00000476559 ATF5Q9Y2D1 282 aaPredicted RBP20.73■□□□□ 0.91
RPGR-207ENST00000476559 ABCB7O75027 752 aa20.69■□□□□ 0.9
RPGR-207ENST00000476559 ATXN8OSP0DMR3 200 aa20.55■□□□□ 0.88
RPGR-207ENST00000476559 POLA2Q14181 598 aa20.47■□□□□ 0.87
RPGR-207ENST00000476559 ZBTB12Q9Y330 459 aaPredicted RBP20.02■□□□□ 0.8
RPGR-207ENST00000476559 FBLN2P98095 1184 aa19.84■□□□□ 0.77
RPGR-207ENST00000476559 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
RPGR-207ENST00000476559 MKRN4PQ13434 485 aaPredicted RBP19.78■□□□□ 0.76
RPGR-207ENST00000476559 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
RPGR-207ENST00000476559 SPDYE2BA6NHP3 402 aa19.47■□□□□ 0.71
RPGR-207ENST00000476559 SPDYE6P0CI01 402 aa19.47■□□□□ 0.71
RPGR-207ENST00000476559 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
RPGR-207ENST00000476559 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
RPGR-207ENST00000476559 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
RPGR-207ENST00000476559 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
RPGR-207ENST00000476559 SSUH2Q9Y2M2 353 aa19.28■□□□□ 0.68
RPGR-207ENST00000476559 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
RPGR-207ENST00000476559 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
RPGR-207ENST00000476559 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
RPGR-207ENST00000476559 PITPNM1O00562 1244 aa19.11■□□□□ 0.65
RPGR-207ENST00000476559 CLEC11AQ9Y240 323 aa19.01■□□□□ 0.63
RPGR-207ENST00000476559 SPDYE1Q8NFV5 336 aaPredicted RBP19■□□□□ 0.63
RPGR-207ENST00000476559 POTEHQ6S545 545 aa18.96■□□□□ 0.63
RPGR-207ENST00000476559 FKBP8Q14318 412 aa18.86■□□□□ 0.61
RPGR-207ENST00000476559 PIP4P2Q8N4L2 257 aa18.83■□□□□ 0.6
RPGR-207ENST00000476559 FXR2P51116 673 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPGR-207ENST00000476559 PRR29P0C7W0 189 aa18.74■□□□□ 0.59
RPGR-207ENST00000476559 PROM2Q8N271 834 aa18.71■□□□□ 0.59
RPGR-207ENST00000476559 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
RPGR-207ENST00000476559 PRKAR2AP13861 404 aaKnown RBP18.63■□□□□ 0.57
RPGR-207ENST00000476559 CHADLQ6NUI6 762 aa18.59■□□□□ 0.57
RPGR-207ENST00000476559 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
RPGR-207ENST00000476559 HAX1O00165 279 aa18.36■□□□□ 0.53
RPGR-207ENST00000476559 FARP1Q9Y4F1 1045 aaPredicted RBP18.32■□□□□ 0.52
RPGR-207ENST00000476559 MIER1Q8N108 512 aa18.24■□□□□ 0.51
RPGR-207ENST00000476559 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
RPGR-207ENST00000476559 EVX2Q03828 476 aa18.18■□□□□ 0.5
RPGR-207ENST00000476559 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
RPGR-207ENST00000476559 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
RPGR-207ENST00000476559 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
RPGR-207ENST00000476559 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
RPGR-207ENST00000476559 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPGR-207ENST00000476559 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
RPGR-207ENST00000476559 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
RPGR-207ENST00000476559 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
RPGR-207ENST00000476559 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
RPGR-207ENST00000476559 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
RPGR-207ENST00000476559 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
RPGR-207ENST00000476559 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
RPGR-207ENST00000476559 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
RPGR-207ENST00000476559 RASEFQ8IZ41 740 aa17.81■□□□□ 0.44
RPGR-207ENST00000476559 ZNF579Q8NAF0 562 aaKnown RBP17.78■□□□□ 0.44
RPGR-207ENST00000476559 GABBR2O75899 941 aa17.77■□□□□ 0.44
RPGR-207ENST00000476559 NUBP1P53384 320 aa17.77■□□□□ 0.44
RPGR-207ENST00000476559 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
RPGR-207ENST00000476559 PHF12Q96QT6 1004 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms